RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 TLE4Q04727 773 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 DUSP2Q05923 314 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 DUSP8Q13202 625 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 LTB4RQ15722 352 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 SPDYAQ5MJ70 313 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 SCIMPQ6UWF3 145 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 C16orf78Q8WTQ4 265 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 MZB1Q8WU39 189 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 EXOSC8Q96B26 276 aaKnown RBP14.15□□□□□ -0.14
CPSF1-211ENST00000533492 CTHRC1Q96CG8 243 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 OMA1Q96E52 524 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 APIPQ96GX9 242 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 ZNF681Q96N22 645 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 GNRHR2Q96P88 292 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 KCNA7Q96RP8 456 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 PLLPQ9Y342 182 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 PCDHGB3Q9Y5G1 929 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 DCHS2Q6V1P9 2916 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 A0A0G2JNJ9 132 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 GNB5O14775 395 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 ACOX3O15254 700 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 CBX7O95931 251 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 PCSK2P16519 638 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 DRD5P21918 477 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 TIA1P31483 386 aaKnown RBP eCLIP14.14□□□□□ -0.15
CPSF1-211ENST00000533492 PPICP45877 212 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 SLCO1A2P46721 670 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 RAE1P78406 368 aaKnown RBP14.14□□□□□ -0.15
CPSF1-211ENST00000533492 MRPS35P82673 323 aaKnown RBP14.14□□□□□ -0.15
CPSF1-211ENST00000533492 PLCXD2Q0VAA5 305 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 IMPG1Q17R60 797 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 CCDC153Q494R4 210 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 CFAP157Q5JU67 520 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 ZYG11AQ6WRX3 759 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 CLYBLQ8N0X4 340 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 EIF1ADQ8N9N8 165 aaKnown RBP14.14□□□□□ -0.15
CPSF1-211ENST00000533492 CCDC63Q8NA47 563 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 ACBD4Q8NC06 268 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 SIMC1Q8NDZ2 872 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 OR1J4Q8NGS1 313 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 TMEM41AQ96HV5 264 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 EBPLQ9BY08 206 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 GSTO2Q9H4Y5 243 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 NPDC1Q9NQX5 325 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-211ENST00000533492 Q9UFV3 132 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 GRID1Q9ULK0 1009 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 ADGRG4Q8IZF6 3080 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 HCFC1P51610 2035 aa14.14□□□□□ -0.15
CPSF1-211ENST00000533492 SERTM1A2A2V5 107 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 SMIM23A6NLE4 172 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 AHRRA9YTQ3 701 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 G3V2L1 256 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 H3BQF6 201 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 SHBGP04278 402 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 HPNP05981 417 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 ANXA4P09525 319 aaPredicted RBP14.13□□□□□ -0.15
CPSF1-211ENST00000533492 CAPN3P20807 821 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 MSX1P28360 303 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 MPIP34949 423 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 ADH7P40394 386 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 GSTM5P46439 218 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 EMDP50402 254 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 CDK9P50750 372 aaKnown RBP14.13□□□□□ -0.15
CPSF1-211ENST00000533492 NAGLUP54802 743 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 TFF3Q07654 80 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 C2orf80Q0P641 193 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 SF3B4Q15427 424 aaKnown RBP eCLIP14.13□□□□□ -0.15
CPSF1-211ENST00000533492 ERCC6LQ2NKX8 1250 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 RIPPLY2Q5TAB7 128 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 TIGD3Q6B0B8 471 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 SLC30A6Q6NXT4 461 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 ULK2Q8IYT8 1036 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 LRRN4CLQ8ND94 238 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 CDC26Q8NHZ8 85 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 ZNF675Q8TD23 568 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 KAT2AQ92830 837 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 BBS4Q96RK4 519 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 TREX2Q9BQ50 279 aaPredicted RBP14.13□□□□□ -0.15
CPSF1-211ENST00000533492 UBQLN3Q9H347 655 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 PPCSQ9HAB8 311 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 MCCC2Q9HCC0 563 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 SLC35C2Q9NQQ7 365 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 EHD3Q9NZN3 535 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 KLRF1Q9NZS2 232 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 SENP1Q9P0U3 644 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 EMCNQ9ULC0 261 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 C15orf41Q9Y2V0 281 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 FBN2P35556 2912 aa14.13□□□□□ -0.15
CPSF1-211ENST00000533492 FRG2CA6NGY1 282 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 HSPB2A8KAH6 182 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 UBFD1O14562 309 aaKnown RBP14.12□□□□□ -0.15
CPSF1-211ENST00000533492 COPEO14579 308 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 REM1O75628 298 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 PROCP04070 461 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 IGFBP2P18065 325 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 CRHR1P34998 444 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 GCKP35557 465 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 KRT20P35900 424 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 FOXA1P55317 472 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 HSPB2Q16082 182 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms