RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 C1orf50Q9BV19 199 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 PNPOQ9NVS9 261 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 SEC14L3Q9UDX4 400 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 EML6Q6ZMW3 1958 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 SCAMP2O15127 329 aaKnown RBP18.83■□□□□ 0.6
CCS-208ENST00000533244 TO15178 435 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 ACOX3O15254 700 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 PDPK1O15530 556 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 NAGAP17050 411 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 DRD5P21918 477 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 ABCD3P28288 659 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 NRG3P56975 720 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 OCRLQ01968 901 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 EMX2Q04743 252 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 PTGR1Q14914 329 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 RPS6KA2Q15349 733 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 KRTCAP3Q53RY4 240 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 SLC22A10Q63ZE4 541 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 TMEM64Q6YI46 380 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 TRIM42Q8IWZ5 723 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 LRRC34Q8IZ02 419 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 OR2L13Q8N349 312 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 FBXW8Q8N3Y1 598 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 PRR7Q8TB68 274 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 HSPBAP1Q96EW2 488 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 FAM173AQ9BQD7 235 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 AKTIPQ9H8T0 292 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 PROK2Q9HC23 129 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 CNIH4Q9P003 139 aa18.83■□□□□ 0.6
CCS-208ENST00000533244 CNOT11Q9UKZ1 510 aaKnown RBP18.83■□□□□ 0.6
CCS-208ENST00000533244 C19orf53Q9UNZ5 99 aaPredicted RBP18.83■□□□□ 0.6
CCS-208ENST00000533244 GPR55Q9Y2T6 319 aaPredicted RBP18.83■□□□□ 0.6
CCS-208ENST00000533244 FRG2CA6NGY1 282 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 CAPN14A8MX76 684 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 KLF11O14901 512 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 GLSO94925 669 aaPredicted RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 UNC5CO95185 931 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 ZIC2O95409 532 aaPredicted RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 P04436 131 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 MC3RP41968 323 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 TMED10P49755 219 aaKnown RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 KCNK10P57789 538 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 C21orf58P58505 322 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 FOXO1Q12778 655 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 MAD2L1Q13257 205 aaPredicted RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 UBAP2LQ14157 1087 aaKnown RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 ATG16L1Q676U5 607 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 TMEM107Q6UX40 140 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 GFRALQ6UXV0 394 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 BNC2Q6ZN30 1099 aaPredicted RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 GK5Q6ZS86 529 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 R3HCC1LQ7Z5L2 792 aaKnown RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 RIMKLAQ8IXN7 391 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 CIDECQ96AQ7 238 aaPredicted RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 NTNG2Q96CW9 530 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 ELP4Q96EB1 424 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 SECISBP2Q96T21 854 aaKnown RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 TSPAN10Q9H1Z9 355 aaPredicted RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 MANSC1Q9H8J5 431 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 MEAF6Q9HAF1 191 aa18.82■□□□□ 0.6
CCS-208ENST00000533244 ACSS1Q9NUB1 689 aaPredicted RBP18.82■□□□□ 0.6
CCS-208ENST00000533244 NPIPA5E9PKD4 350 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 G3V3Y1 287 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 UPK1AO00322 258 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 COQ9O75208 318 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 STSP08842 583 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 CT45A8P0DMV1 189 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 CT45A9P0DMV2 189 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 HPCAL1P37235 193 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 RPL3P39023 403 aaKnown RBP18.81■□□□□ 0.6
CCS-208ENST00000533244 RFC3P40938 356 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 FBXW4P57775 412 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 NNATQ16517 81 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 HYAL4Q2M3T9 481 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 CT45A2Q5DJT8 189 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 FAM47EQ6ZV65 393 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 ZNF551Q7Z340 670 aaPredicted RBP18.81■□□□□ 0.6
CCS-208ENST00000533244 FAM13CQ8NE31 585 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 ZBED6CLQ96FA7 236 aaPredicted RBP18.81■□□□□ 0.6
CCS-208ENST00000533244 NUF2Q9BZD4 464 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 FOLH1BQ9HBA9 442 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 TAS2R9Q9NYW1 312 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 NOP53Q9NZM5 478 aaKnown RBP18.81■□□□□ 0.6
CCS-208ENST00000533244 SH3BP4Q9P0V3 963 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 NPIPA1Q9UND3 350 aa18.81■□□□□ 0.6
CCS-208ENST00000533244 EIF3LQ9Y262 564 aaKnown RBP18.81■□□□□ 0.6
CCS-208ENST00000533244 ANKRD33BA6NCL7 494 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 ASNA1O43681 348 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 SEMA7AO75326 666 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 PPM1BO75688 479 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 SASH3O75995 380 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 G6PDP11413 515 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 DDX5P17844 614 aaKnown RBP18.8■□□□□ 0.6
CCS-208ENST00000533244 PIGAP37287 484 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 DNASE1L1P49184 302 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 MLC1Q15049 377 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 CMPK2Q5EBM0 449 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 NPSR1Q6W5P4 371 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 CHERPQ8IWX8 916 aaKnown RBP18.8■□□□□ 0.6
CCS-208ENST00000533244 PRR22Q8IZ63 422 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms