RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TMEM64Q6YI46 380 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 ZNF551Q7Z340 670 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 LRRC34Q8IZ02 419 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 ZFP62Q8NB50 900 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 OR2M7Q8NG81 312 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 PAQR8Q8TEZ7 354 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 CIDECQ96AQ7 238 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 ELP4Q96EB1 424 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 HSPBAP1Q96EW2 488 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 LCORQ96JN0 433 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 MEAF6Q9HAF1 191 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 SACM1LQ9NTJ5 587 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 NOP53Q9NZM5 478 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 C19orf53Q9UNZ5 99 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 GPR55Q9Y2T6 319 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 SVILO95425 2214 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 ZGRF1Q86YA3 2104 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 BAHCC1Q9P281 2608 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 RELNP78509 3460 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 MYO18BQ8IUG5 2567 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 CLEC18AA5D8T8 446 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 PINLYPA6NC86 204 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 NPIPA5E9PKD4 350 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 SLCO1B7G3V0H7 640 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 UPK1AO00322 258 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 SCAMP2O15127 329 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 TO15178 435 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 ACOX3O15254 700 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 HDAC3O15379 428 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 PDPK1O15530 556 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 P04436 131 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 CCL3P10147 92 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 G6PDP11413 515 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 NAGAP17050 411 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 DDX5P17844 614 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 PRPS1L1P21108 318 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 ABCD3P28288 659 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 HPCAL1P37235 193 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 MC3RP41968 323 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 MANFP55145 182 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 CLDN8P56748 225 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 C21orf58P58505 322 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 SRSF1Q07955 248 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 KRTCAP3Q53RY4 240 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 TMEM107Q6UX40 140 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 CLEC18BQ6UXF7 455 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 LARP4Q71RC2 724 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 SIAH3Q8IW03 269 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 WDR75Q8IWA0 830 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 RIMKLAQ8IXN7 391 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 OR2L13Q8N349 312 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 CLEC18CQ8NCF0 446 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 OR7A2PQ8NGA2 310 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 OR10G3Q8NGC4 313 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 ZFP28Q8NHY6 868 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 PRR7Q8TB68 274 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 COQ8BQ96D53 544 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 ZBED6CLQ96FA7 236 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 VSTM2LQ96N03 204 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 BTBD9Q96Q07 612 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 FAM173AQ9BQD7 235 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 FOLH1BQ9HBA9 442 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 ACSS1Q9NUB1 689 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 TAS2R9Q9NYW1 312 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 CNIH4Q9P003 139 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 SEC14L3Q9UDX4 400 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 NPIPA1Q9UND3 350 aa11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 CHCHD2Q9Y6H1 151 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-216ENST00000529856 A0A0G2JMM0 328 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 A0A1W2PPB8 328 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 A0A1W2PRS3 328 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 FRG2CA6NGY1 282 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 TRPC5OSA6NMA1 111 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 KIR3DP1A8MWS1 328 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 G3V3Y1 287 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 SDHDO14521 159 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 TP53I11O14683 189 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 ASNA1O43681 348 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 COQ9O75208 318 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 NME6O75414 186 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 ERN1O75460 977 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 UNC5CO95185 931 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 PSMG1O95456 288 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 ABCB1P08183 1280 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 CT45A8P0DMV1 189 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 CT45A9P0DMV2 189 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 KITP10721 976 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 LAMP1P11279 417 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 ZNF24P17028 368 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 LBPP18428 481 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 PIGAP37287 484 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 RFC3P40938 356 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 TMED10P49755 219 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 DIO3P55073 304 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 FBXW4P57775 412 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 KCNK10P57789 538 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 PPP2R2AP63151 447 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 HSPB3Q12988 150 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 NNATQ16517 81 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 CT45A2Q5DJT8 189 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms