RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 POLR2J2Q9GZM3 115 aaKnown RBP13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 RAB33BQ9H082 229 aa13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 POLR2J3Q9H1A7 115 aaKnown RBP13.86□□□□□ -0.19
ECHDC1-220ENST00000528402 TDRD6O60522 2096 aaKnown RBP13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 ZNF99A8MXY4 864 aaPredicted RBP13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 GASTP01350 101 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 WNT1P04628 370 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 GUSBP08236 651 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 OSMP13725 252 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 PVRP15151 417 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 PCMT1P22061 227 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 ELAVL4P26378 380 aaKnown RBP13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 EPHA4P54764 986 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 UGT2B15P54855 530 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 VSX2P58304 361 aaPredicted RBP13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 BIKQ13323 160 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 GANABQ14697 944 aaKnown RBP13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 ARHGAP11BQ3KRB8 267 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 CYP27C1Q4G0S4 372 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 ZNF628Q5EBL2 1059 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 ZNF311Q5JNZ3 666 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 GTF2IRD2BQ6EKJ0 949 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 GPR153Q6NV75 609 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 DEF8Q6ZN54 512 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 GTF2IRD2Q86UP8 949 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 MCATQ8IVS2 390 aaKnown RBP13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 CA13Q8N1Q1 262 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 DNAJC22Q8N4W6 341 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 OR7G2Q8NG99 324 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 LMX1AQ8TE12 382 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 TRUB1Q8WWH5 349 aaKnown RBP13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 RORBQ92753 470 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 KAT2AQ92830 837 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 CLDN23Q96B33 292 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 C12orf43Q96C57 262 aaKnown RBP13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 SLC35A4Q96G79 324 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 STACQ99469 402 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 SLC38A3Q99624 504 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 NIPSNAP1Q9BPW8 284 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 SLC38A1Q9H2H9 487 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 PIGUQ9H490 435 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 POLE3Q9NRF9 147 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 RLIMQ9NVW2 624 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 IMPAD1Q9NX62 359 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 SATB2Q9UPW6 733 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 RNF6Q9Y252 685 aa13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 MRPS33Q9Y291 106 aaKnown RBP13.85□□□□□ -0.19
ECHDC1-220ENST00000528402 KRBA1A5PL33 1030 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 ZAR1LA6NP61 321 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 PCDHGA12O60330 932 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 PROS1P07225 676 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 SLC35E2P0CK97 266 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 TYRP1P17643 537 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 GSTM3P21266 225 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 FMO3P31513 532 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 CAPZBP47756 277 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 EMP3P54852 163 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 SIM1P81133 766 aaPredicted RBP13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 RPL6Q02878 288 aaKnown RBP13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 FUT5Q11128 374 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 FAM53BQ14153 422 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 PRTGQ2VWP7 1150 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 EIPR1Q53HC9 387 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 FGD3Q5JSP0 725 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 EXOSC6Q5RKV6 272 aaKnown RBP13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 GPR107Q5VW38 600 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 AP1ARQ63HQ0 302 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 FRMD1Q8N878 549 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 CDRT4Q8N9R6 151 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 OR9Q2Q8NGE9 314 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 FAM81AQ8TBF8 368 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 COL26A1Q96A83 441 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 CD180Q99467 661 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 ARHGDIGQ99819 225 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 YIPF4Q9BSR8 244 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 FUZQ9BT04 418 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 CCDC90BQ9GZT6 254 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 GPN2Q9H9Y4 310 aaPredicted RBP13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 DUSP22Q9NRW4 184 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 C2orf42Q9NWW7 574 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 A4GNTQ9UNA3 340 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 C5orf42Q9H799 3197 aa13.84□□□□□ -0.19
ECHDC1-220ENST00000528402 TRBV4-1A0A0J9YWV2 114 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 SH3PXD2BA1X283 911 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 LMO7DNF2Z398 122 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 AQP9O43315 295 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 OR10H3O60404 316 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 COQ9O75208 318 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 WBP4O75554 376 aaKnown RBP13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 THBS1P07996 1170 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 HTR1AP08908 422 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 ALOX5P09917 674 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 ALPPL2P10696 532 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 ST6GAL1P15907 406 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 EPHA2P29317 976 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 KRT20P35900 424 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 NXPH1P58417 271 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 EMX1Q04741 257 aaPredicted RBP13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 LARS2Q15031 903 aaKnown RBP13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 PTGES3Q15185 160 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms