RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PYROXD1Q8WU10 500 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 DCAKDQ8WVC6 231 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 TMEM170AQ8WVE7 144 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 PEX13Q92968 403 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 LRRC39Q96DD0 335 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 ATXN7L3BQ96GX2 97 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 NDNQ99608 321 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 OLFM1Q99784 485 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 NPLQ9BXD5 320 aaPredicted RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 OR2AG1Q9H205 316 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CAB39LQ9H9S4 337 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 C20orf96Q9NUD7 363 aaPredicted RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 EURLQ9NYK6 297 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF224Q9NZL3 707 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 VPS18Q9P253 973 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 IFT80Q9P2H3 777 aaPredicted RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CRLS1Q9UJA2 301 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 MOSPD1Q9UJG1 213 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 APPL1Q9UKG1 709 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 KCNK6Q9Y257 313 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SLC17A4Q9Y2C5 497 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 WDR37Q9Y2I8 494 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CRYL1Q9Y2S2 319 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 PCDHGA5Q9Y5G8 931 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 DGKBQ9Y6T7 804 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CROCCQ5TZA2 2017 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 KNTC1P50748 2209 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 SLC5A10A0PJK1 596 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 MAGEB16A2A368 324 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 HMX3A6NHT5 357 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 OR52A4PA6NMU1 304 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 HNRNPCL2B2RXH8 293 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 AP3B1O00203 1094 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CACNB4O00305 520 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 EBAG9O00559 213 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 AQP9O43315 295 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 VEGFDO43915 354 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 GPC4O75487 556 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CDK14O94921 469 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 TTC4O95801 387 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 TSPAN12O95859 305 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ADAP00813 363 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 TNFP01375 233 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CD59P13987 128 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ATP1B2P14415 290 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 GNSP15586 552 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 H2AFXP16104 143 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF7P17097 686 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 MSH3P20585 1137 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 RPS3P23396 243 aaKnown RBP eCLIP2.79□□□□□ -1.961e-6■■□□□ 13
CSDE1-208ENST00000524652 NFKBIAP25963 317 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 PBLDP30039 288 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 NUDT1P36639 197 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 NSG1P42857 185 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 MAGEA12P43365 314 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 TNNT3P45378 269 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 RXRGP48443 463 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 TTPAP49638 278 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 THOP1P52888 689 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CRIP2P52943 208 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ARSFP54793 590 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CSE1LP55060 971 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ADARP55265 1226 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 EIF3BP55884 814 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CLDN6P56747 220 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 PHEXP78562 749 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 PDE1BQ01064 536 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 PPARDQ03181 441 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 DMPKQ09013 629 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 DNAJC3Q13217 504 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 GRB7Q14451 532 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ITIH4Q14624 930 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 BRD3Q15059 726 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 RBBP5Q15291 538 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 DEFB133Q30KQ1 61 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 GPR33Q49SQ1 333 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CCSMST1Q4G0I0 132 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 BCL7AQ4VC05 210 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 DNAJC21Q5F1R6 531 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 BEND6Q5SZJ8 279 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ARMC3Q5W041 872 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ZDHHC20Q5W0Z9 365 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 FAM122CQ6P4D5 195 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CYHR1Q6ZMK1 362 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 SH2D5Q6ZV89 423 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CYS1Q717R9 158 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 NLRP9Q7RTR0 991 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 TAS2R42Q7RTR8 314 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CMC1Q7Z7K0 106 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 LRRTM4Q86VH4 590 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 IQCHQ86VS3 1027 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ZC3HC1Q86WB0 502 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 C17orf82Q86X59 251 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 TRAPPC5Q8IUR0 188 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 SLC35F3Q8IY50 421 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CACNA2D3Q8IZS8 1091 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 GHDCQ8N2G8 530 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 MREGQ8N565 214 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 EIF1ADQ8N9N8 165 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms