RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	RPL21	P46778	160 aa	Known RBP	3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	CEBPD	P49716	269 aa	Predicted RBP	3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	CLDN20	P56880	219 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	MAP3K7CL	P57077	242 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	HERV-K104	P63124	156 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	MYBPC1	Q00872	1141 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	BST1	Q10588	318 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	ILF2	Q12905	390 aa	Known RBP	3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	PLA2G7	Q13093	441 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	CUL1	Q13616	776 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	SELPLG	Q14242	412 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	SSX2	Q16385	188 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	MPPE1	Q53F39	396 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	PDLIM3	Q53GG5	364 aa	Predicted RBP	3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	AGK	Q53H12	422 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	IL23R	Q5VWK5	629 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	NKAIN2	Q5VXU1	208 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	CARD17	Q5XLA6	110 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	PDPK2P	Q6A1A2	396 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	TTC19	Q6DKK2	380 aa	Predicted RBP	3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	SLC39A4	Q6P5W5	647 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	TMEM71	Q6P5X7	295 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	LRRC8B	Q6P9F7	803 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	CD164L2	Q6UWJ8	174 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	COMTD1	Q86VU5	262 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	GCSAM	Q8N6F7	178 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	ACVR1C	Q8NER5	493 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	BBS1	Q8NFJ9	593 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	BPIFC	Q8NFQ6	507 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	OR9A1P	Q8NGU1	263 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	SLC2A14	Q8TDB8	520 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	CHPT1	Q8WUD6	406 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	SLC44A1	Q8WWI5	657 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	TAAR8	Q969N4	342 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	OTULIN	Q96BN8	352 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	C8orf76	Q96K31	380 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	ARL5B	Q96KC2	179 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	ANKRD27	Q96NW4	1050 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	NPAS2	Q99743	824 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	CCDC94	Q9BW85	323 aa	Predicted RBP	3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	MRPL37	Q9BZE1	423 aa	Known RBP	3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	PARVG	Q9HBI0	331 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	PNRC2	Q9NPJ4	139 aa	Known RBP	3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	TMEM45A	Q9NWC5	275 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	MSRB1	Q9NZV6	116 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	SPATA7	Q9P0W8	599 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	MUTYH	Q9UIF7	546 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	TMED3	Q9Y3Q3	217 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	RNF115	Q9Y4L5	304 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	ACACB	O00763	2458 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	MYO15A	Q9UKN7	3530 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	GPR179	Q6PRD1	2367 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	ELP1	O95163	1332 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	DOCK1	Q14185	1865 aa		3.9	□□□□□ -1.79
PCM1-223	ENST00000524356	MYH2	Q9UKX2	1941 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	MYH13	Q9UKX3	1938 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	SIPA1L1	O43166	1804 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	VPS13A	Q96RL7	3174 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	BAHCC1	Q9P281	2608 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356		A0A1W2PP11	408 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	HYKK	A2RU49	373 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	OR6C74	A6NCV1	312 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	SPINT2	O43291	252 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	ARHGEF9	O43307	516 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	AKR7A2	O43488	359 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	NME2P1	O60361	137 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	DUSP11	O75319	330 aa	Known RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	TRIM3	O75382	744 aa	Predicted RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	SYNGR4	O95473	234 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	CSTA	P01040	98 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	LCK	P06239	509 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	FH	P07954	510 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	MMP3	P08254	477 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	ACAA1	P09110	424 aa	Predicted RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	ERVK-10	P10266	1014 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	SLC2A3	P11169	496 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	F3	P13726	295 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	GCFC2	P16383	781 aa	Known RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	GOT1	P17174	413 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	CD58	P19256	250 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	UQCRC2	P22695	453 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	CHI3L1	P36222	383 aa	Predicted RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	NKX2-1	P43699	371 aa	Predicted RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	STAR	P49675	285 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	SLC8A3	P57103	927 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	DSCR9	P59020	149 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	TAS2R38	P59533	333 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	NUCB2	P80303	420 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	DEFB103A	P81534	67 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	SLC3A1	Q07837	685 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	FOXM1	Q08050	763 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	CRYZ	Q08257	329 aa	Known RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	IL10RB	Q08334	325 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	RASGEF1B	Q0VAM2	473 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	NONO	Q15233	471 aa	Known RBP eCLIP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	TRIP10	Q15642	601 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	STX1A	Q16623	288 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	RAB6C	Q53S08	254 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	C10orf120	Q5SQS8	335 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms