RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	GPN3	Q9UHW5	284 aa	Predicted RBP	7.4	□□□□□ -1.22
SPIDR-223	ENST00000524033	ENOPH1	Q9UHY7	261 aa		7.4	□□□□□ -1.22
SPIDR-223	ENST00000524033	ZNF221	Q9UK13	617 aa		7.4	□□□□□ -1.22
SPIDR-223	ENST00000524033	SLC22A14	Q9Y267	594 aa		7.4	□□□□□ -1.22
SPIDR-223	ENST00000524033	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	7.4	□□□□□ -1.22
SPIDR-223	ENST00000524033	ENPP4	Q9Y6X5	453 aa		7.4	□□□□□ -1.22
SPIDR-223	ENST00000524033	LRRK1	Q38SD2	2015 aa		7.4	□□□□□ -1.23
SPIDR-223	ENST00000524033	CCDC88C	Q9P219	2028 aa		7.4	□□□□□ -1.23
SPIDR-223	ENST00000524033	SDK1	Q7Z5N4	2213 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	PLXND1	Q9Y4D7	1925 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	PRAMEF33	A0A0G2JMD5	474 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	LOC100506127	A0A0U1RQW1	187 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033		A0A1B0GVT2	93 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	FAM221B	A6H8Z2	402 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	TMEM8B	A6NDV4	472 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	HMX3	A6NHT5	357 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	ARHGEF33	A8MVX0	844 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033		E7EQ34	232 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF670-ZNF695	F2Z2N8	137 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033		M0R129	80 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CTDSP2	O14595	271 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	PRAMEF10	O60809	474 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	PSIP1	O75475	530 aa	Known RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CCNK	O75909	580 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	KLHL18	O94889	574 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLCO2B1	O94956	709 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	AP2A2	O94973	939 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CCNB2	O95067	398 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SEMA4F	O95754	770 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CER1	O95813	267 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	LGI1	O95970	557 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	APOA1	P02647	267 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	OPN1SW	P03999	348 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SCG5	P05408	212 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CELA2B	P08218	269 aa	Predicted RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	TNFRSF1B	P20333	461 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	GK	P32189	559 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SOX6	P35712	828 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CRYBB2	P43320	205 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CRISP1	P54107	249 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CDH12	P55289	794 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	DCDC1	P59894	354 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	COPZ1	P61923	177 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	PSPH	P78330	225 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	BNC1	Q01954	994 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	IRF8	Q02556	426 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	ACSM2A	Q08AH3	577 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	ASAH1	Q13510	395 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SCARB2	Q14108	478 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SUZ12	Q15022	739 aa	Known RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CARTPT	Q16568	116 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	MPEG1	Q2M385	716 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	HNRNPA1L2	Q32P51	320 aa	Known RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	GLYR1	Q49A26	553 aa	Predicted RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF658B	Q4V348	819 aa	Predicted RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SPIN4	Q56A73	249 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	C9orf64	Q5T6V5	341 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CPTP	Q5TA50	214 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	NXNL2	Q5VZ03	156 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZDHHC20	Q5W0Z9	365 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	ACSM2B	Q68CK6	577 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF776	Q68DI1	518 aa	Predicted RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	PLAG1	Q6DJT9	500 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	RETSAT	Q6NUM9	610 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	KLHL17	Q6TDP4	642 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	LYPD4	Q6UWN0	246 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	RFLNA	Q6ZTI6	216 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	THOC6	Q86W42	341 aa	Known RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	LIX1L	Q8IVB5	337 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLC30A8	Q8IWU4	369 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR9Q2	Q8NGE9	314 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR6K2	Q8NGY2	324 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	BTN2A2	Q8WVV5	523 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	C17orf50	Q8WW18	174 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	FGF11	Q92914	225 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	MAL2	Q969L2	176 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	KIAA1143	Q96AT1	154 aa	Predicted RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	REPS1	Q96D71	796 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR4K3	Q96R72	315 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	MGLL	Q99685	303 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	PIP5K1A	Q99755	562 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	RSPH9	Q9H1X1	276 aa	Predicted RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	ABCG8	Q9H221	673 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	MTG2	Q9H4K7	406 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	MYNN	Q9NPC7	610 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	TM7SF3	Q9NS93	570 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SH3BP4	Q9P0V3	963 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	STOX2	Q9P2F5	926 aa	Predicted RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	REV1	Q9UBZ9	1251 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SEC14L4	Q9UDX3	406 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	KLK13	Q9UKR3	277 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	PCOLCE2	Q9UKZ9	415 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	SCML1	Q9UN30	329 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	WBP11	Q9Y2W2	641 aa	Known RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	MSRB2	Q9Y3D2	182 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	LOC400499	M0QZD8	3231 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	TPR	P12270	2363 aa	Known RBP	7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	CELSR3	Q9NYQ7	3312 aa		7.39	□□□□□ -1.23
SPIDR-223	ENST00000524033	EDDM13	A0A1B0GTR0	161 aa		7.38	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms