RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 MAPRE3Q9UPY8 281 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 SNX24Q9Y343 169 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 ANGPTL3Q9Y5C1 460 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 COL6A5A8TX70 2615 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 LRRC14BA6NHZ5 514 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 FOXE1O00358 373 aaPredicted RBP20.63■□□□□ 0.89
PVT1-218ENST00000523328 CBR3O75828 277 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 CPMP14384 443 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 SPRP35270 261 aaPredicted RBP20.63■□□□□ 0.89
PVT1-218ENST00000523328 XKP51811 444 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 DIO3P55073 304 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 SNTA1Q13424 505 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 GAB1Q13480 694 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 RAPH1Q70E73 1250 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 TBC1D1Q86TI0 1168 aaPredicted RBP20.63■□□□□ 0.89
PVT1-218ENST00000523328 CREG2Q8IUH2 290 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 SIMC1Q8NDZ2 872 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 OR14L1PQ8NHC6 308 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 NXNL1Q96CM4 212 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 BDH2Q9BUT1 245 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 RNF11Q9Y3C5 154 aa20.63■□□□□ 0.89
PVT1-218ENST00000523328 SMAD7O15105 426 aaKnown RBP20.62■□□□□ 0.89
PVT1-218ENST00000523328 UGT2B11O75310 529 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 NT5EP21589 574 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 CHMP24386 653 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 CPOXP36551 454 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 STARP49675 285 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 LHX2P50458 406 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 FAM27E3Q08E93 113 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 MGAT2Q10469 447 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 GRTP1Q5TC63 336 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 C6orf163Q5TEZ5 329 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 YTHDF3Q7Z739 585 aaKnown RBP20.62■□□□□ 0.89
PVT1-218ENST00000523328 L3MBTL4Q8NA19 623 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 RDH11Q8TC12 318 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 OMA1Q96E52 524 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 WFIKKN1Q96NZ8 548 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 ITPAQ9BY32 194 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 SAYSD1Q9NPB0 183 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 KLRF1Q9NZS2 232 aa20.62■□□□□ 0.89
PVT1-218ENST00000523328 A0A1W2PNV4 684 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 TRIM64A6NGJ6 449 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 TRIM64BA6NI03 449 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 PLOD2O00469 737 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 MSTNO14793 375 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 SEMA3DO95025 777 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 PORP16435 677 aaPredicted RBP20.61■□□□□ 0.89
PVT1-218ENST00000523328 CNTFP26441 200 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 PIK3CGP48736 1102 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 PCYT1AP49585 367 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 CLDN18P56856 261 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 GPX6P59796 221 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 EEF1A1P68104 462 aaKnown RBP20.61■□□□□ 0.89
PVT1-218ENST00000523328 SLMAPQ14BN4 828 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 ACKR1Q16570 336 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 PRICKLE4Q2TBC4 344 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 KBTBD12Q3ZCT8 623 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 EEF1A1P5Q5VTE0 462 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 FAM111BQ6SJ93 734 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 SCIMPQ6UWF3 145 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 C3orf62Q6ZUJ4 267 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 IFNEQ86WN2 208 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 CTAGE3PQ8IX95 158 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 CENPLQ8N0S6 344 aaPredicted RBP20.61■□□□□ 0.89
PVT1-218ENST00000523328 RHEBL1Q8TAI7 183 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 EHD3Q9NZN3 535 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 CFL2Q9Y281 166 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 ROS1P08922 2347 aa20.61■□□□□ 0.89
PVT1-218ENST00000523328 FBN1P35555 2871 aaKnown RBP20.6■□□□□ 0.89
PVT1-218ENST00000523328 ATRQ13535 2644 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 SYCE1LA8MT33 242 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 INAFM1C9JVW0 142 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 HCRTR2O43614 444 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 TGM6O95932 706 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 CRABP2P29373 138 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 MC3RP41968 323 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 PLCXD2Q0VAA5 305 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 GTF2H2Q13888 395 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 EXOSC7Q15024 291 aaKnown RBP20.6■□□□□ 0.89
PVT1-218ENST00000523328 PFKFB4Q16877 469 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 GTF2H2CQ6P1K8 395 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 GOLGA7Q7Z5G4 137 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 GRAMD2AQ8IUY3 354 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 PPP1R14CQ8TAE6 165 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 KCTD4Q8WVF5 259 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 LCORQ96JN0 433 aaPredicted RBP20.6■□□□□ 0.89
PVT1-218ENST00000523328 SERPINI1Q99574 410 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 CCL19Q99731 98 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 IPPKQ9H8X2 491 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 KLHL28Q9NXS3 571 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 TAS2R10Q9NYW0 307 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 MAT2BQ9NZL9 334 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 ZNF639Q9UID6 485 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 CES1P1Q9UKY3 287 aa20.6■□□□□ 0.89
PVT1-218ENST00000523328 PRAMEF25A6NGN4 478 aa20.59■□□□□ 0.89
PVT1-218ENST00000523328 ACOX3O15254 700 aa20.59■□□□□ 0.89
PVT1-218ENST00000523328 EIF3HO15372 352 aaKnown RBP eCLIP20.59■□□□□ 0.89
PVT1-218ENST00000523328 ZNF708P17019 499 aa20.59■□□□□ 0.89
PVT1-218ENST00000523328 FPR1P21462 350 aa20.59■□□□□ 0.89
PVT1-218ENST00000523328 CRYGSP22914 178 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms