RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PEX19P40855 299 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 C21orf59P57076 290 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 MAD2L1BPQ15013 274 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 C14orf28Q4W4Y0 310 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 HEPHL1Q6MZM0 1159 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 CCDC71Q8IV32 467 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 OR9A4Q8NGU2 314 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 NECAB3Q96P71 396 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 PINK1Q9BXM7 581 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 VCX3AQ9NNX9 186 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 UCKL1Q9NWZ5 548 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 TMCC3Q9ULS5 477 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 SCN3AQ9NY46 2000 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 TRBV4-1A0A0J9YWV2 114 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 PIAS2O75928 621 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 EPPINO95925 133 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 LGI1O95970 557 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 H1F0P07305 194 aaKnown RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 TTKP33981 857 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 SOX18P35713 384 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 PPM1FP49593 454 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 CXCR4P61073 352 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 CHRNEQ04844 493 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 NEDD8Q15843 81 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 FGD3Q5JSP0 725 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 FHL5Q5TD97 284 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 WDR53Q7Z5U6 358 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 B3GNT8Q7Z7M8 397 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 HMGN2P46Q86SG4 172 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 AQP11Q8NBQ7 271 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 SLC16A11Q8NCK7 471 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 SGCDQ92629 289 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 C19orf53Q9UNZ5 99 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 PCDHGA6Q9Y5G7 932 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 TDRD6O60522 2096 aaKnown RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 BCAT2O15382 392 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 SLITRK5O94991 958 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 ALPPP05187 535 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 JUNBP17275 347 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 AFF3P51826 1226 aaKnown RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 SMIM11AP58511 58 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 FOXD4Q12950 439 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 RAB39AQ14964 217 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 TRMT12Q53H54 448 aaKnown RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 ZNF770Q6IQ21 691 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 B3GNT6Q6ZMB0 384 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 SPARTQ8N0X7 666 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 PARP8Q8N3A8 854 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 SIMC1Q8NDZ2 872 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 TUBA1CQ9BQE3 449 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 QRSL1Q9H0R6 528 aaKnown RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 DUSP15Q9H1R2 295 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 PTTG2Q9NZH5 202 aa17.3■□□□□ 0.36
TRAPPC9-210ENST00000521667 A0A087WV62 115 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 CHST10O43529 356 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 XPNPEP2O43895 674 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 HTR1AP08908 422 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 NT5EP21589 574 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 ELAVL4P26378 380 aaKnown RBP17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 FMO3P31513 532 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 GGT2P36268 569 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 HPCAP84074 193 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 DMWDQ09019 674 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 NDUFA9Q16795 377 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 ZNF311Q5JNZ3 666 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 WDR45BQ5MNZ6 344 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 DCST1Q5T197 706 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 Q6ZPB1 254 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 SLC9A6Q92581 669 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 CDS1Q92903 461 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 GTPBP3Q969Y2 492 aaKnown RBP17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 TGM7Q96PF1 710 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 CXorf21Q9HAI6 301 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 PAK1IP1Q9NWT1 392 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 AASSQ9UDR5 926 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 ENOPH1Q9UHY7 261 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 A4GNTQ9UNA3 340 aa17.29■□□□□ 0.36
TRAPPC9-210ENST00000521667 RHPN2P1A8MT19 583 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 PTGES3LE9PB15 166 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 SYT5O00445 386 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 FAAHO00519 579 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 UGT2B17O75795 530 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 OXSR1O95747 527 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 GASTP01350 101 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 POU2F1P14859 743 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 PDX1P52945 283 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 GFERP55789 205 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 SKP1P63208 163 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 PROX2Q3B8N5 592 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 LAIR1Q6GTX8 287 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 CLVS1Q8IUQ0 354 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 ENTHD1Q8IYW4 607 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 ANKRD9Q96BM1 317 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 FANCEQ9HB96 536 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 RASSF1Q9NS23 344 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 TPRKBQ9Y3C4 175 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 A0A0A6YYC8 382 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 TLCD2A6NGC4 264 aa17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 I3L1I5 382 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC9-210ENST00000521667 AHCYL1O43865 530 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms