RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 FBXW4P57775 412 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 MAGOHP61326 146 aaKnown RBP19■□□□□ 0.63
TRIM35-203ENST00000521253 PPIAP62937 165 aaKnown RBP19■□□□□ 0.63
TRIM35-203ENST00000521253 FOXO1Q12778 655 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 RPS6KA2Q15349 733 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 CMPK2Q5EBM0 449 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 PRAMEF20Q5VT98 475 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 HHATQ5VTY9 493 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 ANKRD26P1Q6NSI1 321 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 BNC2Q6ZN30 1099 aaPredicted RBP19■□□□□ 0.63
TRIM35-203ENST00000521253 CHERPQ8IWX8 916 aaKnown RBP19■□□□□ 0.63
TRIM35-203ENST00000521253 PRR22Q8IZ63 422 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 FBXW8Q8N3Y1 598 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 OR52N2Q8NGI0 321 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 TLCD1Q96CP7 247 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 MAGED4Q96JG8 741 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 LCORQ96JN0 433 aaPredicted RBP19■□□□□ 0.63
TRIM35-203ENST00000521253 PSMG3-AS1Q96PY0 264 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 GLIPR2Q9H4G4 154 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 PROK2Q9HC23 129 aa19■□□□□ 0.63
TRIM35-203ENST00000521253 TUBA8Q9NY65 449 aaPredicted RBP19■□□□□ 0.63
TRIM35-203ENST00000521253 SPTBN1Q01082 2364 aaKnown RBP18.99■□□□□ 0.63
TRIM35-203ENST00000521253 TP53I11O14683 189 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 ZNHIT1O43257 154 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 SLC1A6P48664 564 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 TMED10P49755 219 aaKnown RBP18.99■□□□□ 0.63
TRIM35-203ENST00000521253 DCAF7P61962 342 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.99■□□□□ 0.63
TRIM35-203ENST00000521253 ATP6AP1LQ52LC2 224 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 C6orf136Q5SQH8 315 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 FJX1Q86VR8 437 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 RELTQ969Z4 430 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 ZNF764Q96H86 408 aaPredicted RBP18.99■□□□□ 0.63
TRIM35-203ENST00000521253 AMDHD1Q96NU7 426 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 SORT1Q99523 831 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 REEP4Q9H6H4 257 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 IL1RL2Q9HB29 575 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 CNIH4Q9P003 139 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 CNOT11Q9UKZ1 510 aaKnown RBP18.99■□□□□ 0.63
TRIM35-203ENST00000521253 ZNF835Q9Y2P0 537 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 GPR55Q9Y2T6 319 aaPredicted RBP18.99■□□□□ 0.63
TRIM35-203ENST00000521253 RAP2CQ9Y3L5 183 aa18.99■□□□□ 0.63
TRIM35-203ENST00000521253 A0A1B0GUH1 482 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 ACOT7O00154 380 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 CDC40O60508 579 aaKnown RBP eCLIP18.98■□□□□ 0.63
TRIM35-203ENST00000521253 DRD5P21918 477 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 MAPK1P28482 360 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 MC3RP41968 323 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 CA7P43166 264 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 PPICP45877 212 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 ASMTP46597 345 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 KCNJ2P63252 427 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 STX3Q13277 289 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 PDE7AQ13946 482 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 PDCD2Q16342 344 aaPredicted RBP18.98■□□□□ 0.63
TRIM35-203ENST00000521253 ZNF385BQ569K4 471 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 TMEM107Q6UX40 140 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 RGS9BPQ6ZS82 235 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 FGD2Q7Z6J4 655 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 SLC22A16Q86VW1 577 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 SPPL2CQ8IUH8 684 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 MGARPQ8TDB4 240 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 DIO2Q92813 273 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 CIDECQ96AQ7 238 aaPredicted RBP18.98■□□□□ 0.63
TRIM35-203ENST00000521253 PPCDCQ96CD2 204 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 TUBGCP3Q96CW5 907 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 HSPBAP1Q96EW2 488 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 VSTM2LQ96N03 204 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 BTBD9Q96Q07 612 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 C1orf50Q9BV19 199 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 DEFB127Q9H1M4 99 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 ZDHHC11Q9H8X9 412 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 SH3BGRL2Q9UJC5 107 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.98■□□□□ 0.63
TRIM35-203ENST00000521253 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.98■□□□□ 0.63
TRIM35-203ENST00000521253 CROCCQ5TZA2 2017 aa18.98■□□□□ 0.63
TRIM35-203ENST00000521253 A0A087WV62 115 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 FRG2CA6NGY1 282 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 PLOD2O00469 737 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 ACOX3O15254 700 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 PDPK1O15530 556 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 TBX19O60806 448 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 PPM1BO75688 479 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 SLITRK5O94991 958 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 SNUPNO95149 360 aaKnown RBP18.97■□□□□ 0.63
TRIM35-203ENST00000521253 ABCB1P08183 1280 aaPredicted RBP18.97■□□□□ 0.63
TRIM35-203ENST00000521253 SLC18A1P54219 525 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 BST1Q10588 318 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 C3AR1Q16581 482 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 BICRALQ6AI39 1079 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 Q6ZPB1 254 aaPredicted RBP18.97■□□□□ 0.63
TRIM35-203ENST00000521253 LIX1Q8N485 282 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 TMEM251Q8N6I4 163 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 FNDC5Q8NAU1 212 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 SPPL2AQ8TCT8 520 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 OMA1Q96E52 524 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 FOLH1BQ9HBA9 442 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 PLSCR2Q9NRY7 297 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 SH3BP4Q9P0V3 963 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 HAO1Q9UJM8 370 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms