RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 PCDHGB3Q9Y5G1 929 aa5.91□□□□□ -1.46
IGHV4-55-201ENST00000520889 HEMK1Q9Y5R4 338 aaPredicted RBP5.91□□□□□ -1.46
IGHV4-55-201ENST00000520889 TRBV5-3A0A0A0MS03 114 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 C15orf38-AP3S2A0A0A6YYH1 394 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 A0A1W2PS29 197 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 FRG2CA6NGY1 282 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 TMEM200CA6NKL6 621 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 A8MUA0 341 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 MKRN2OSH3BPM6 223 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ERVH48-1M5A8F1 160 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 NR5A2O00482 541 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 PRKAR1AP10644 381 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ITGAMP11215 1152 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 BMP2P12643 396 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 HOXB9P17482 250 aaPredicted RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 CAPN3P20807 821 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ITGA3P26006 1051 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 MC3RP41968 323 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 TMED10P49755 219 aaKnown RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 CDK9P50750 372 aaKnown RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 PGDP52209 483 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 DGKQP52824 942 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 PSMD4P55036 377 aaKnown RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 NME5P56597 212 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 NRG3P56975 720 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 MRPS22P82650 360 aaKnown RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 MRPS35P82673 323 aaKnown RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 HSPB3Q12988 150 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 MFAP5Q13361 173 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 TP53BP2Q13625 1128 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ZNHIT3Q15649 155 aaPredicted RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 LTB4RQ15722 352 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 TBR1Q16650 682 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 DEFB109BQ30KR1 87 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ZNF750Q32MQ0 723 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 SPATS1Q496A3 300 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 CYP27C1Q4G0S4 372 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 TIGD2Q4W5G0 525 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 PIGGQ5H8A4 983 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 FAM69BQ5VUD6 431 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 HLA-DQA1Q5Y7H0 255 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 SAXO2Q658L1 398 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ANKRD26P1Q6NSI1 321 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 MFSD12Q6NUT3 480 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 CDC73Q6P1J9 531 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 OPN5Q6U736 354 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 TMEM107Q6UX40 140 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ARPINQ7Z6K5 226 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 RPS19BP1Q86WX3 136 aaKnown RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 C9orf40Q8IXQ3 194 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 CLECL1Q8IZS7 167 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 TAGAPQ8N103 731 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 NUP43Q8NFH3 380 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ADCY4Q8NFM4 1077 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 OR52R1Q8NGF1 315 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 OR4A15Q8NGL6 344 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 SLC22A8Q8TCC7 542 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ZFP90Q8TF47 636 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 HAS2Q92819 552 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 KAT2AQ92830 837 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 THOC3Q96J01 351 aaKnown RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 LCORQ96JN0 433 aaPredicted RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 MARK4Q96L34 752 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 SGCZQ96LD1 299 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 CNTNAP3BQ96NU0 1288 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 SECISBP2Q96T21 854 aaKnown RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 CNPPD1Q9BV87 410 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 SPATA9Q9BWV2 254 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ACTRT3Q9BYD9 372 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 CNTNAP3Q9BZ76 1288 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 WWTR1Q9GZV5 400 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 PAIP1Q9H074 479 aaKnown RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 PIGUQ9H490 435 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 EPS8L2Q9H6S3 715 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ZNF552Q9H707 407 aaPredicted RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 CXorf36Q9H7Y0 433 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 EFCAB1Q9HAE3 211 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 FOLH1BQ9HBA9 442 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ZCCHC3Q9NUD5 404 aaKnown RBP5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 GPATCH2Q9NW75 528 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 GID8Q9NWU2 228 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 NDE1Q9NXR1 346 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 GPR83Q9NYM4 423 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 BCAP29Q9UHQ4 241 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 PRDM4Q9UKN5 801 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ERVK-11Q9UQG0 969 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 ZNF451Q9Y4E5 1061 aa5.9□□□□□ -1.46
IGHV4-55-201ENST00000520889 CNTRLQ7Z7A1 2325 aa5.9□□□□□ -1.47
IGHV4-55-201ENST00000520889 CACNA1GO43497 2377 aa5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 TRBV11-1A0A0K0K1C0 115 aa5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 RNF103-CHMP3A0A140T963 221 aa5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 ASPDHA6ND91 283 aa5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 HRKO00198 91 aa5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 FBP2O00757 339 aa5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 HNRNPCL1O60812 293 aaKnown RBP5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 ANP32DO95626 131 aa5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 CPSF4O95639 269 aaKnown RBP5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 HMGN2P05204 90 aaKnown RBP5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 ALOX5P09917 674 aa5.89□□□□□ -1.47
IGHV4-55-201ENST00000520889 CT45A8P0DMV1 189 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms