RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TREX2Q9BQ50 279 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 YIPF4Q9BSR8 244 aa14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 OSBPL10Q9BXB5 764 aa14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 CXorf21Q9HAI6 301 aa14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 CACYBPQ9HB71 228 aaKnown RBP14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 ADAP2Q9NPF8 381 aa14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 C11orf16Q9NQ32 467 aa14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 DUSP22Q9NRW4 184 aa14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 THSD1Q9NS62 852 aa14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 LANCL2Q9NS86 450 aa14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 OAZ3Q9UMX2 235 aa14.08□□□□□ -0.16
TRAPPC9-205ENST00000518839 MFN2O95140 757 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 HPRP00739 348 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 OPN1SWP03999 348 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 UQCRBP14927 111 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 KCNC4Q03721 635 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 ZFP36L1Q07352 338 aaKnown RBP14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 GK3PQ14409 553 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 ZNHIT3Q15649 155 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 MAPK11Q15759 364 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 ARHGAP11BQ3KRB8 267 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 HIPK1Q86Z02 1210 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 EPHX4Q8IUS5 362 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 GALNT4Q8N4A0 578 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 RCBTB1Q8NDN9 531 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 PROX1Q92786 737 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 PMM1Q92871 262 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 FKBP10Q96AY3 582 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 C7orf34Q96L11 122 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 ZNF597Q96LX8 424 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 PTCHD1Q96NR3 888 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 OSBPL11Q9BXB4 747 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 NTN4Q9HB63 628 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 AKAP7Q9P0M2 348 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 IFT80Q9P2H3 777 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 SEC14L3Q9UDX4 400 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 SATB2Q9UPW6 733 aa14.07□□□□□ -0.16
TRAPPC9-205ENST00000518839 PRAMEF27A3QJZ7 478 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 TMEM229AB2RXF0 380 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 G3V2T6 193 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 ADAMDEC1O15204 470 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 CASC3O15234 703 aaKnown RBP14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 ACOX3O15254 700 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 PRAMEF2O60811 474 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 E2F6O75461 281 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 SCRG1O75711 98 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 CDC123O75794 336 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 ONECUT2O95948 504 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 IFNA16P05015 189 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 CT62P0C5K7 136 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 FGF5P12034 268 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 CD247P20963 164 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 SOX18P35713 384 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 KCNJ5P48544 419 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 BTG2P78543 158 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 VLDLRP98155 873 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 ILKQ13418 452 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 ERV3-1Q14264 604 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 RPS26P11Q5JNZ5 115 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 CBR4Q8N4T8 237 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 CHDHQ8NE62 594 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 OR7G1Q8NGA0 311 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 OR10Q1Q8NGQ4 319 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 SLC9A6Q92581 669 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 HOXB13Q92826 284 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 NRBF2Q96F24 287 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 SLC35A4Q96G79 324 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 ZNF354BQ96LW1 612 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 COL21A1Q96P44 957 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 TGIF2Q9GZN2 237 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 RUBCNLQ9H714 662 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 REEP1Q9H902 201 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 TMEM9BQ9NQ34 198 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 POLE3Q9NRF9 147 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 C14orf105Q9NVL8 296 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 CLDN16Q9Y5I7 305 aa14.06□□□□□ -0.16
TRAPPC9-205ENST00000518839 ZNF318Q5VUA4 2279 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 MYOCOSA0A1B0GUC4 107 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 EFCAB7A8K855 629 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 TMX2-CTNND1H3BSU7 103 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 TGFBR3LH3BV60 316 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 hCG_2039718K7EN88 272 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 SOCS2O14508 198 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 LRP3O75074 770 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 H6PDO95479 791 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 CBX7O95931 251 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 IFNW1P05000 195 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 ALPPP05187 535 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 CHRM4P08173 479 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 GUSBP08236 651 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 ACP2P11117 423 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 TNNI3P19429 210 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 MAOAP21397 527 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 FPR1P21462 350 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 DNAJA1P31689 397 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 CCKBRP32239 447 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 RORAP35398 523 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 MAP3K8P41279 467 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 E2F1Q01094 437 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 FUT5Q11128 374 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms