RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 COMTD1Q86VU5 262 aa21.86■■□□□ 1.09
SLIT3-204ENST00000518140 ARMC8Q8IUR7 673 aa21.86■■□□□ 1.09
SLIT3-204ENST00000518140 LGI4Q8N135 537 aa21.86■■□□□ 1.09
SLIT3-204ENST00000518140 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.86■■□□□ 1.09
SLIT3-204ENST00000518140 CYGBQ8WWM9 190 aa21.86■■□□□ 1.09
SLIT3-204ENST00000518140 FBXL20Q96IG2 436 aa21.86■■□□□ 1.09
SLIT3-204ENST00000518140 A0A1W2PQM1 296 aa21.85■■□□□ 1.09
SLIT3-204ENST00000518140 HYAL3O43820 417 aaPredicted RBP21.85■■□□□ 1.09
SLIT3-204ENST00000518140 CDH2P19022 906 aaPredicted RBP21.85■■□□□ 1.09
SLIT3-204ENST00000518140 EXOSC7Q15024 291 aaKnown RBP21.85■■□□□ 1.09
SLIT3-204ENST00000518140 SLC36A3Q495N2 470 aa21.85■■□□□ 1.09
SLIT3-204ENST00000518140 SHQ1Q6PI26 577 aaKnown RBP21.85■■□□□ 1.09
SLIT3-204ENST00000518140 APOBEC4Q8WW27 367 aaKnown RBP21.85■■□□□ 1.09
SLIT3-204ENST00000518140 ZG16BQ96DA0 208 aa21.85■■□□□ 1.09
SLIT3-204ENST00000518140 QRSL1Q9H0R6 528 aaKnown RBP21.85■■□□□ 1.09
SLIT3-204ENST00000518140 CUTCQ9NTM9 273 aa21.85■■□□□ 1.09
SLIT3-204ENST00000518140 MAT2BQ9NZL9 334 aa21.85■■□□□ 1.09
SLIT3-204ENST00000518140 DHCR7Q9UBM7 475 aaKnown RBP21.85■■□□□ 1.09
SLIT3-204ENST00000518140 SAMHD1Q9Y3Z3 626 aaKnown RBP21.85■■□□□ 1.09
SLIT3-204ENST00000518140 CLDN16Q9Y5I7 305 aa21.85■■□□□ 1.09
SLIT3-204ENST00000518140 TMEM247A6NEH6 219 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 ALAS2P22557 587 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 TUBA4AP68366 448 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 SLC13A2Q13183 592 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 GPAT3Q53EU6 434 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 PRSS42Q7Z5A4 293 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 CARFQ8N187 725 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 ZBTB44Q8NCP5 570 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 OR51Q1Q8NH59 317 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 B4GALNT2Q8NHY0 566 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 SDCCAG3Q96C92 435 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 MS4A4EQ96PG1 132 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 ADAP2Q9NPF8 381 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 PTGFRNQ9P2B2 879 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 GMEB2Q9UKD1 530 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 C19orf53Q9UNZ5 99 aaPredicted RBP21.84■■□□□ 1.09
SLIT3-204ENST00000518140 TESMINQ9Y4I5 508 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 GPC6Q9Y625 555 aaPredicted RBP21.84■■□□□ 1.09
SLIT3-204ENST00000518140 CCDC88CQ9P219 2028 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 SEC16AO15027 2179 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 RRM2P31350 389 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 SLC5A2P31639 672 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 OR1D4P47884 311 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 OR6C4Q8NGE1 309 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 SLC9A6Q92581 669 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 RMND5BQ96G75 393 aaPredicted RBP21.84■■□□□ 1.09
SLIT3-204ENST00000518140 ZNF300Q96RE9 604 aaPredicted RBP21.84■■□□□ 1.09
SLIT3-204ENST00000518140 TIMMDC1Q9NPL8 285 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 SLC6A14Q9UN76 642 aa21.84■■□□□ 1.09
SLIT3-204ENST00000518140 ARHGAP33O14559 1287 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 ZIC2O95409 532 aaPredicted RBP21.83■■□□□ 1.09
SLIT3-204ENST00000518140 PNLIPP16233 465 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 PPP2R1BP30154 601 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 DNAJA1P31689 397 aaKnown RBP21.83■■□□□ 1.09
SLIT3-204ENST00000518140 MAGEA8P43361 318 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 AVPR1BP47901 424 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 TMEM71Q6P5X7 295 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 HIPK1Q86Z02 1210 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 RBM45Q8IUH3 476 aaKnown RBP21.83■■□□□ 1.09
SLIT3-204ENST00000518140 DHRSXQ8N5I4 330 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 FAM181AQ8N9Y4 354 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 OR4D11Q8NGI4 311 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 GEMIN6Q8WXD5 167 aaKnown RBP21.83■■□□□ 1.09
SLIT3-204ENST00000518140 CDS1Q92903 461 aa21.83■■□□□ 1.09
SLIT3-204ENST00000518140 GTPBP2Q9BX10 602 aaKnown RBP21.83■■□□□ 1.09
SLIT3-204ENST00000518140 TMEFF2Q9UIK5 374 aaPredicted RBP21.83■■□□□ 1.09
SLIT3-204ENST00000518140 ZNF749O43361 778 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 CTNSO60931 367 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 TRMUO75648 421 aaKnown RBP21.83■■□□□ 1.08
SLIT3-204ENST00000518140 SLC35E2P0CK97 266 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 THRBP10828 461 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 ACP2P11117 423 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 MAOAP21397 527 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 CNR2P34972 360 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 KCNJ5P48544 419 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 ANXA11P50995 505 aaKnown RBP21.83■■□□□ 1.08
SLIT3-204ENST00000518140 CRISP3P54108 245 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 CHRNEQ04844 493 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 DUSP5Q16690 384 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 SLC23A3Q6PIS1 610 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 CYP4Z1Q86W10 505 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 RCBTB1Q8NDN9 531 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 CEP76Q8TAP6 659 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 ADAMTS15Q8TE58 950 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 CTHRC1Q96CG8 243 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 ZNF607Q96SK3 696 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 REEP1Q9H902 201 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 BCL2L10Q9HD36 194 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 USE1Q9NZ43 259 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 SEC14L3Q9UDX4 400 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 RSL24D1Q9UHA3 163 aaKnown RBP21.83■■□□□ 1.08
SLIT3-204ENST00000518140 NDOR1Q9UHB4 597 aa21.83■■□□□ 1.08
SLIT3-204ENST00000518140 NINQ8N4C6 2090 aa21.82■■□□□ 1.08
SLIT3-204ENST00000518140 PLOD3O60568 738 aa21.82■■□□□ 1.08
SLIT3-204ENST00000518140 FCMRO60667 390 aa21.82■■□□□ 1.08
SLIT3-204ENST00000518140 MITFO75030 526 aaPredicted RBP21.82■■□□□ 1.08
SLIT3-204ENST00000518140 RPLP0P05388 317 aaKnown RBP21.82■■□□□ 1.08
SLIT3-204ENST00000518140 PCSK6P29122 969 aa21.82■■□□□ 1.08
SLIT3-204ENST00000518140 HOXD12P35452 270 aa21.82■■□□□ 1.08
SLIT3-204ENST00000518140 XCR1P46094 333 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms