RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RGPD8O14715 1765 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 RGPD5Q99666 1765 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SPATA31A1Q5TZJ5 1347 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 LRP5O75197 1615 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 COL22A1Q8NFW1 1626 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRAMEF33A0A0G2JMD5 474 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM72A0PK05 275 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CLCA1A8K7I4 914 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 HMSDA8MTL9 139 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 NPIPB8E9PQR5 432 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ARPC2O15144 300 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SIGLEC5O15389 551 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 LRRTM2O43300 516 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GRID2O43424 1007 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 NUDT21O43809 227 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 XPNPEP2O43895 674 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MPZL2O60487 215 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MSCO60682 206 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC19A2O60779 497 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRAMEF10O60809 474 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRAMEF2O60811 474 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 KHDRBS3O75525 346 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GPX5O75715 221 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GATBO75879 557 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 RGS11O94810 467 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 KDM4BO94953 1096 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZBTB7AO95365 584 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GSRP00390 522 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 EGFP01133 1207 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CRYBA1P05813 215 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CD2P06729 351 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GJB1P08034 283 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GUSBP08236 651 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MMP10P09238 476 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR8G3PP0DMU2 310 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 IL7RP16871 459 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF14P17017 642 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TPH1P17752 444 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 NFYAP23511 347 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GADD45AP24522 165 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ALDH4A1P30038 563 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TGFBR2P37173 567 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR1G1P47890 313 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 KCNJ3P48549 501 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CASP9P55211 416 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 RAP2BP61225 183 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CXADRP78310 365 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TNFRSF17Q02223 184 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TLE4Q04727 773 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TNFRSF9Q07011 255 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CACNB2Q08289 660 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TWF1Q12792 350 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PDZK1IP1Q13113 114 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PICALMQ13492 652 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MTM1Q13496 603 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CAMK2DQ13557 499 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SEMA5AQ13591 1074 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GANABQ14697 944 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 IRF4Q15306 451 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF630Q2M218 657 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 EXOC3L2Q2M3D2 409 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CBWD6Q4V339 395 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 USP39Q53GS9 565 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SPOUT1Q5T280 376 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 FAM69AQ5T7M9 428 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 HEPHL1Q6MZM0 1159 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CAPN13Q6MZZ7 669 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PAMR1Q6UXH9 720 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SPNS3Q6ZMD2 512 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF783Q6ZMS7 281 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZCCHC23Q6ZST2 131 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PTCHD4Q6ZW05 846 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ABHD13Q7L211 337 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC16A14Q7RTX9 510 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PIWIL4Q7Z3Z4 852 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MAVSQ7Z434 540 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PLEKHH3Q7Z736 793 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 RBM23Q86U06 439 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 LDB1Q86U70 411 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 LRRTM4Q86VH4 590 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TGIF2LXQ8IUE1 241 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 VRK3Q8IV63 474 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MISPQ8IVT2 679 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MFSD6LQ8IWD5 586 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 DCUN1D3Q8IWE4 304 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 DNAJC10Q8IXB1 793 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GCNT2Q8N0V5 402 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 STK40Q8N2I9 435 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CBARPQ8N350 705 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CERS5Q8N5B7 392 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 EFHBQ8N7U6 833 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SYT14Q8NB59 555 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GLIS1Q8NBF1 620 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 HSD17B11Q8NBQ5 300 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PLA2G15Q8NCC3 412 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 BBS1Q8NFJ9 593 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 BEST4Q8NFU0 473 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 RDM1Q8NG50 284 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR10A7Q8NGE5 316 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR8J2Q8NGG1 315 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms