RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PTCHD1Q96NR3 888 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 TM9SF2Q99805 663 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC12A9Q9BXP2 914 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 SFXN1Q9H9B4 322 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 DIABLOQ9NR28 239 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 NUFIP1Q9UHK0 495 aaKnown RBP10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 PCDHGB7Q9Y5F8 929 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 PAPPA2Q9BXP8 1791 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 ARHGEF15O94989 841 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 TSPAN12O95859 305 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 ATP5A1P25705 553 aaKnown RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 EPHA2P29317 976 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 TNFSF8P32971 234 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 SOX3P41225 446 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 MICAQ29983 383 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 LRIT3Q3SXY7 679 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC29A4Q7RTT9 530 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 TRIM46Q7Z4K8 759 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC9B2Q86UD5 537 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 OR5AR1Q8NGP9 310 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 SPATA9Q9BWV2 254 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 KATNBL1Q9H079 304 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 ACTL8Q9H568 366 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 STOX2Q9P2F5 926 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 OSGIN1Q9UJX0 560 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 TPRP12270 2363 aaKnown RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 PRAMEF33A0A0G2JMD5 474 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 OR52A4PA6NMU1 304 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 PRAMEF10O60809 474 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 ZNF821O75541 412 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 IL1RNP18510 177 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 PCMT1P22061 227 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 EIF1AXP47813 144 aaKnown RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 TRAM2Q15035 370 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 TMPRSS9Q7Z410 1059 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 AMIGO1Q86WK6 493 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 NUP43Q8NFH3 380 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 THEM6Q8WUY1 208 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 HRASLS5Q96KN8 279 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 BHLHE41Q9C0J9 482 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 NDRG4Q9ULP0 352 aaKnown RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 HSPB11Q9Y547 144 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 FKBP7Q9Y680 259 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 ATRXP46100 2492 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 CSN2P05814 226 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 EDNRAP25101 427 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 CST5P28325 142 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 SELENOWP63302 87 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 BTBD16Q32M84 506 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 FLYWCH1Q4VC44 716 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 C22orf42Q6IC83 251 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 HSD11B1LQ7Z5J1 315 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 ASPGQ86U10 573 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 THAP3Q8WTV1 239 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC22A12Q96S37 553 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 KLF16Q9BXK1 252 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC17A9Q9BYT1 436 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 CHIAQ9BZP6 476 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 B3GNT4Q9C0J1 378 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 PRODHO43272 600 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 PRSS23O95084 383 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 KCNK5O95279 499 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 MRPL3P09001 348 aaKnown RBP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 HSD3B1P14060 373 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 HSD3B2P26439 372 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 CDC20Q12834 499 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 C1QTNF12Q5T7M4 302 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 LHFPL3Q86UP9 236 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 KLHDC8BQ8IXV7 354 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 TMEM156Q8N614 296 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 FAM83CQ9BQN1 747 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 OR51I1Q9H343 314 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC2A4RGQ9NR83 387 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
PCDHGA1-202ENST00000517417 ZFC3H1O60293 1989 aaKnown RBP10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 TIMP1P01033 207 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 HLA-DPB1P04440 258 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 TGFBR2P37173 567 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 MRPL19P49406 292 aaKnown RBP10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 ADAM8P78325 824 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 TIAL1Q01085 375 aaKnown RBP eCLIP10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 FAM214AQ32MH5 1076 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 LMNTD1Q8N9Z9 388 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 TPSD1Q9BZJ3 242 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLIRPQ9GZT3 109 aaKnown RBP10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 RDH14Q9HBH5 336 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 GPN1Q9HCN4 374 aaPredicted RBP10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 KLRF1Q9NZS2 232 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 STUB1Q9UNE7 303 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 NEU3Q9UQ49 428 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 MGAT4BQ9UQ53 548 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 MEIOCA2RUB1 952 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 TMEM189-UBE2V1I3L0A0 370 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 PROM1O43490 865 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 ADAMTS4O75173 837 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 SPNP16150 400 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 NTSR1P30989 418 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 MAP3K8P41279 467 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 HTR2BP41595 481 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms