RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 OR52N2Q8NGI0 321 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 OR9A2Q8NGT5 310 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 SPPL2AQ8TCT8 520 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 SREK1Q8WXA9 508 aaKnown RBP8.93□□□□□ -0.98
RNF4-221ENST00000513643 HGDQ93099 445 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 EXOSC8Q96B26 276 aaKnown RBP8.93□□□□□ -0.98
RNF4-221ENST00000513643 HSPBAP1Q96EW2 488 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 PKNOX2Q96KN3 472 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 AMDHD1Q96NU7 426 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 ITPAQ9BY32 194 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 ANGPTL4Q9BY76 406 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 TTTY12Q9BZ98 90 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 STMN4Q9H169 189 aaPredicted RBP8.93□□□□□ -0.98
RNF4-221ENST00000513643 GLIPR2Q9H4G4 154 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 IL1RL2Q9HB29 575 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 SACM1LQ9NTJ5 587 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 ATP6V1HQ9UI12 483 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 NPIPA1Q9UND3 350 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 C19orf53Q9UNZ5 99 aaPredicted RBP8.93□□□□□ -0.98
RNF4-221ENST00000513643 ERVK-11Q9UQG0 969 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 HRH3Q9Y5N1 445 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 CROCCQ5TZA2 2017 aa8.93□□□□□ -0.98
RNF4-221ENST00000513643 A0A1B0GUH1 482 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 FRG2CA6NGY1 282 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 UPK1AO00322 258 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 HS6ST1O60243 411 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 SLC19A2O60779 497 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 SNNO75324 88 aaPredicted RBP8.92□□□□□ -0.98
RNF4-221ENST00000513643 ERLIN1O75477 346 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 LYPLA1O75608 230 aaPredicted RBP8.92□□□□□ -0.98
RNF4-221ENST00000513643 PPM1BO75688 479 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 AGFG2O95081 481 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 CHEK2O96017 543 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 MYZAPP0CAP1 466 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 PIGAP37287 484 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 PTGDSP41222 190 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 CASP3P42574 277 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 ABCE1P61221 599 aaKnown RBP8.92□□□□□ -0.98
RNF4-221ENST00000513643 PPIAP62937 165 aaKnown RBP8.92□□□□□ -0.98
RNF4-221ENST00000513643 PSPHP78330 225 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 PSG6Q00889 435 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 CASP8Q14790 479 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 MLC1Q15049 377 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 RPS6KA2Q15349 733 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 CHI3L2Q15782 390 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 ZNF385BQ569K4 471 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 NPSR1Q6W5P4 371 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 TMEM64Q6YI46 380 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 DOLPP1Q86YN1 238 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 LRRC34Q8IZ02 419 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 GHDCQ8N2G8 530 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 TMEM251Q8N6I4 163 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 KAT2AQ92830 837 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 COQ8BQ96D53 544 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 MTERF3Q96E29 417 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 ELP4Q96EB1 424 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 SLC35A4Q96G79 324 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 LCORQ96JN0 433 aaPredicted RBP8.92□□□□□ -0.98
RNF4-221ENST00000513643 PPP3R2Q96LZ3 170 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 GAL3ST4Q96RP7 486 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 BRINP2Q9C0B6 783 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 UBQLN3Q9H347 655 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 REEP4Q9H6H4 257 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 ANKRA2Q9H9E1 313 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 ACSS1Q9NUB1 689 aaPredicted RBP8.92□□□□□ -0.98
RNF4-221ENST00000513643 ASIC5Q9NY37 505 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 TUBA8Q9NY65 449 aaPredicted RBP8.92□□□□□ -0.98
RNF4-221ENST00000513643 PRODH2Q9UF12 536 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 BAIAP2L1Q9UHR4 511 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 RAP2CQ9Y3L5 183 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 EML6Q6ZMW3 1958 aa8.92□□□□□ -0.98
RNF4-221ENST00000513643 TMEM120BA0PK00 339 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 CAPN14A8MX76 684 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 TSPAN2O60636 221 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 SNX4O95219 450 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 CLDN1O95832 211 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 P04436 131 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 RFPL3SP0C7P2 107 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 H2AFXP16104 143 aaPredicted RBP8.91□□□□□ -0.98
RNF4-221ENST00000513643 RFC3P40938 356 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 ASMTP46597 345 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 SLC1A6P48664 564 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 DNASE1L1P49184 302 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 FBXW4P57775 412 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 RPL38P63173 70 aaKnown RBP8.91□□□□□ -0.98
RNF4-221ENST00000513643 EMX2Q04743 252 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 BST1Q10588 318 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 SNTA1Q13424 505 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 C3AR1Q16581 482 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 EMC4Q5J8M3 183 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 TBCELQ5QJ74 424 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 C1QL3Q5VWW1 255 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 GK5Q6ZS86 529 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 FAM47EQ6ZV65 393 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 NUP54Q7Z3B4 507 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 FAM9CQ8IZT9 166 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 FAM109AQ8N4B1 249 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 ZNF781Q8N8C0 355 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 PSMA8Q8TAA3 256 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 DMRTA2Q96SC8 542 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms