RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.95	□□□□□ -1.62
MATR3-218	ENST00000511978	EVA1A	Q9H8M9	152 aa		4.95	□□□□□ -1.62
MATR3-218	ENST00000511978	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.95	□□□□□ -1.62
MATR3-218	ENST00000511978	WWOX	Q9NZC7	414 aa		4.95	□□□□□ -1.62
MATR3-218	ENST00000511978	OGFR	Q9NZT2	677 aa		4.95	□□□□□ -1.62
MATR3-218	ENST00000511978	SPAST	Q9UBP0	616 aa		4.95	□□□□□ -1.62
MATR3-218	ENST00000511978	PROCR	Q9UNN8	238 aa		4.95	□□□□□ -1.62
MATR3-218	ENST00000511978	ASCC3	Q8N3C0	2202 aa	Known RBP	4.95	□□□□□ -1.62
MATR3-218	ENST00000511978	DNAH14	Q0VDD8	3507 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	PTPRZ1	P23471	2315 aa	Predicted RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978		A0A1W2PP11	408 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	RGSL1	A5PLK6	1076 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978		A6NCN8	305 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	C5orf60	A6NFR6	353 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	NEMP2	A6NFY4	417 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	USP27X	A6NNY8	438 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	PRSS44	E7EML9	344 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	SMAD9	O15198	467 aa	Known RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	INPP4B	O15327	924 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	KIF5C	O60282	957 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	LDB3	O75112	727 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	TRIM16	O95361	564 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	IFNB1	P01574	187 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	EPO	P01588	193 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	FGG	P02679	453 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	ATP1A1	P05023	1023 aa	Known RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	HOXC4	P09017	264 aa	Predicted RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	GIMD1	P0DJR0	217 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	CTSE	P14091	401 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	MSN	P26038	577 aa	Known RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	HMGCL	P35914	325 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	GNPDA1	P46926	289 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	ACADVL	P49748	655 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	FUT6	P51993	359 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	RPL36A	P83881	106 aa	Known RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	CCDC173	Q0VFZ6	552 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	C1orf61	Q13536	156 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	SNX1	Q13596	522 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	ELOC	Q15369	112 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	SIX1	Q15475	284 aa	Predicted RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	DEFB133	Q30KQ1	61 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	KLHL22	Q53GT1	634 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	KRTCAP3	Q53RY4	240 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	TMEM198	Q66K66	360 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	WBP2NL	Q6ICG8	309 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	ASB18	Q6ZVZ8	466 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	GKN2	Q86XP6	184 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	SLC35F6	Q8N357	371 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	RASGEF1C	Q8N431	466 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	RFLNB	Q8N5W9	214 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	CCDC89	Q8N998	374 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	GPR26	Q8NDV2	337 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	OR56A4	Q8NGH8	313 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	BLOC1S5	Q8TDH9	187 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	C1orf54	Q8WWF1	131 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	SLC44A1	Q8WWI5	657 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	TSACC	Q96A04	125 aa	Predicted RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	LRRC45	Q96CN5	670 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	TBL1Y	Q9BQ87	522 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	APOL2	Q9BQE5	337 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	ZSCAN5A	Q9BUG6	496 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	TRABD	Q9H4I3	376 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	MRPL40	Q9NQ50	206 aa	Known RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	TRMT1	Q9NXH9	659 aa	Known RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	HACD3	Q9P035	362 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	MOSPD1	Q9UJG1	213 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	SLC17A4	Q9Y2C5	497 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	OR2W1	Q9Y3N9	320 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	CMAHP	Q9Y471	501 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	JRKL	Q9Y4A0	524 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	ARL5A	Q9Y689	179 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	CSNK1G3	Q9Y6M4	447 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	CACNA1A	O00555	2505 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	DOCK7	Q96N67	2140 aa		4.94	□□□□□ -1.62
MATR3-218	ENST00000511978	LMO7DN	F2Z398	122 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	BUD23	O43709	281 aa	Known RBP	4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	TPPP	O94811	219 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	AGT	P01019	485 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	TNF	P01375	233 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	IVL	P07476	585 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	CDH1	P12830	882 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	ETS1	P14921	441 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	CKMT2	P17540	419 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	ACP1	P24666	158 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	STIP1	P31948	543 aa	Known RBP	4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	ADRA1A	P35348	466 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	ACTN2	P35609	894 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	SPAM1	P38567	509 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	CLNS1A	P54105	237 aa	Known RBP	4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	ISL1	P61371	349 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	RUNX1T1	Q06455	604 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	SPOCK1	Q08629	439 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	ILK	Q13418	452 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	PARP6	Q2NL67	630 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	ZDHHC20	Q5W0Z9	365 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	KCTD11	Q693B1	232 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	PDPK2P	Q6A1A2	396 aa		4.93	□□□□□ -1.62
MATR3-218	ENST00000511978	FAM151B	Q6UXP7	276 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms