RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 PCDHGB3Q9Y5G1 929 aa8.52□□□□□ -1.05
NR1I3-230ENST00000511944 SNX8Q9Y5X2 465 aa8.52□□□□□ -1.05
NR1I3-230ENST00000511944 TDRD6O60522 2096 aaKnown RBP8.52□□□□□ -1.05
NR1I3-230ENST00000511944 GLOD5A6NK44 160 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 H0Y3Z8 333 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CDX4O14627 284 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 FGF17O60258 216 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CBFA2T3O75081 653 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 PRSS23O95084 383 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 NTRK1P04629 796 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CD63P08962 238 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 ETFAP13804 333 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 FBLP22087 321 aaKnown RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 FASP25445 335 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 NOS3P29474 1203 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CSTF2P33240 577 aaKnown RBP eCLIP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 FEN1P39748 380 aaKnown RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 NBL1P41271 181 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 STT3AP46977 705 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 PTDSS1P48651 473 aaKnown RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 SEPHS1P49903 392 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CLCN2P51788 898 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 SIM1P81133 766 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CDK6Q00534 326 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CHRNB3Q05901 458 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 SCARB2Q14108 478 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 PRICKLE4Q2TBC4 344 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 ZNF628Q5EBL2 1059 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 EXOSC6Q5RKV6 272 aaKnown RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 FHL5Q5TD97 284 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 MFSD12Q6NUT3 480 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CDC73Q6P1J9 531 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CEACAM20Q6UY09 585 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CYP2R1Q6VVX0 501 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 RBM44Q6ZP01 1051 aaKnown RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 LRRC74BQ6ZQY2 392 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 TTLL10Q6ZVT0 673 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CBLL1Q75N03 491 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 ERMP1Q7Z2K6 904 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 TMPRSS9Q7Z410 1059 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 PPP1R3BQ86XI6 285 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 RNF130Q86XS8 419 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 KRT73Q86Y46 540 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 PACRGLQ8N7B6 248 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 NUP43Q8NFH3 380 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 OR2I1PQ8NGU4 316 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 BBS10Q8TAM1 723 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 CANT1Q8WVQ1 401 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 LZICQ8WZA0 190 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 FIG4Q92562 907 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 ANKRD9Q96BM1 317 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 ART5Q96L15 291 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 ZNF607Q96SK3 696 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 STACQ99469 402 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 ACTRT3Q9BYD9 372 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 TRIM8Q9BZR9 551 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 B3GNT4Q9C0J1 378 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 SPRTNQ9H040 489 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 SLC26A1Q9H2B4 701 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 SOX17Q9H6I2 414 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 POLE3Q9NRF9 147 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 PRTFDC1Q9NRG1 225 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 DUSP22Q9NRW4 184 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 AGPAT4Q9NRZ5 378 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 LANCL2Q9NS86 450 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 STARD5Q9NSY2 213 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 EXD2Q9NVH0 621 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 NKX1-2Q9UD57 310 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 ZNF639Q9UID6 485 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 NXT1Q9UKK6 140 aaKnown RBP8.51□□□□□ -1.05
NR1I3-230ENST00000511944 AK5Q9Y6K8 562 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 GON4LQ3T8J9 2241 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 PI4KAP42356 2102 aa8.51□□□□□ -1.05
NR1I3-230ENST00000511944 ADAMTS20P59510 1910 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 IGKV3D-11A0A0A0MRZ8 115 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 A0A0G2JPF8 293 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 FAM86C2PA6NEL3 165 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 ZNF860A6NHJ4 632 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 HNRNPCL2B2RXH8 293 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 HNRNPCL3B7ZW38 293 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-230ENST00000511944 UPK1AO00322 258 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 HMGN4O00479 90 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 DYRK3O43781 588 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 FBXO24O75426 580 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 PRKRAO75569 313 aaKnown RBP8.5□□□□□ -1.05
NR1I3-230ENST00000511944 MED26O95402 600 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 HMGN2P05204 90 aaKnown RBP8.5□□□□□ -1.05
NR1I3-230ENST00000511944 TFPTP0C1Z6 253 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 HNRNPCL4P0DMR1 293 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 ETS2P15036 469 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 EFNA1P20827 205 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-230ENST00000511944 MSX2P35548 267 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-230ENST00000511944 MC3RP41968 323 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 XCR1P46094 333 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 HSPA13P48723 471 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 MAN2A2P49641 1150 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 CRISP3P54108 245 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 MC2RQ01718 297 aa8.5□□□□□ -1.05
NR1I3-230ENST00000511944 STX4Q12846 297 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms