RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 DLGAP4Q9Y2H0 992 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 H0YC42 278 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 UGT2B11O75310 529 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 CBR3O75828 277 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 CRHP06850 196 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 RHOXF2BP0C7M4 288 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 BUD31P41223 144 aaPredicted RBP17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 RAP1GDS1P52306 607 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 TPD52P55327 224 aaPredicted RBP17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 NRG3P56975 720 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 B3GALT5-AS1P59052 145 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 EEF1A1P68104 462 aaKnown RBP17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 RPP38P78345 283 aaKnown RBP17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 VEZF1Q14119 521 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 EEF1A1P5Q5VTE0 462 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 ZNF704Q6ZNC4 412 aaPredicted RBP17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 GALNT12Q8IXK2 581 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 ZNF610Q8N9Z0 462 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 SPC24Q8NBT2 197 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 C17orf47Q8NEP4 570 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 MTERF1Q99551 399 aaKnown RBP17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 REG4Q9BYZ8 158 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 CD244Q9BZW8 370 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 YAE1D1Q9NRH1 226 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 CD274Q9NZQ7 290 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 TEX264Q9Y6I9 313 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 CADP27708 2225 aa17.16■□□□□ 0.34
HMGCS1-206ENST00000511774 YLPM1P49750 1951 aaKnown RBP17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 PHGDHO43175 533 aaKnown RBP17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 CD5LO43866 347 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 ZIC3O60481 467 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 IFNA2P01563 188 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 GBAP04062 536 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 FAM58BPP0C7Q3 252 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 CD1DP15813 335 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 IVDP26440 423 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 GCKP35557 465 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 KRTAP24-1Q3LI83 254 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 CDKL4Q5MAI5 379 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 EXT2Q93063 718 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 OMA1Q96E52 524 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 ITPAQ9BY32 194 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 CXorf56Q9H5V9 222 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 PRM3Q9NNZ6 103 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 ELOVL5Q9NYP7 299 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 KLRF1Q9NZS2 232 aa17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 MTO1Q9Y2Z2 717 aaKnown RBP17.15■□□□□ 0.34
HMGCS1-206ENST00000511774 PRAMEF25A6NGN4 478 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 FRG2CA6NGY1 282 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 CDH16O75309 829 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 CCDC166P0CW27 439 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 PTMSP20962 102 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 MGAT2Q10469 447 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 FAM111BQ6SJ93 734 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 SH2D5Q6ZV89 423 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 NUP54Q7Z3B4 507 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 P4HA3Q7Z4N8 544 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 SFXN2Q96NB2 322 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 TMEM204Q9BSN7 226 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 DDX31Q9H8H2 851 aaKnown RBP17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 POPDC3Q9HBV1 291 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 SMYD2Q9NRG4 433 aa17.14■□□□□ 0.33
HMGCS1-206ENST00000511774 SLC22A20A6NK97 555 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 HS3ST1O14792 307 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 NAGAP17050 411 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 KRT15P19012 456 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 SRD5A2P31213 254 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 KCNJ5P48544 419 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 HMGCS1Q01581 520 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 MGAT5Q09328 741 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 SNTA1Q13424 505 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 FRG1Q14331 258 aaKnown RBP17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 EXOSC7Q15024 291 aaKnown RBP17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 GUSBP1Q15486 140 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 OR5M10Q6IEU7 315 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 GRHL2Q6ISB3 625 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 LRRC70Q7Z2Q7 622 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 ANKMY2Q8IV38 441 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 UBQLNLQ8IYU4 475 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 ZNF611Q8N823 705 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 UBE2E3Q969T4 207 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 ZNF845Q96IR2 970 aaPredicted RBP17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 SLC39A3Q9BRY0 314 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 KLHL4Q9C0H6 718 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 RHOJQ9H4E5 214 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 LYARQ9NX58 379 aaKnown RBP17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 MOCS1Q9NZB8 636 aa17.13■□□□□ 0.33
HMGCS1-206ENST00000511774 OVOL3O00110 214 aa17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 TLX2O43763 284 aaPredicted RBP17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 TBXA2RP21731 343 aa17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 SERPINB1P30740 379 aa17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 SUCLG1P53597 346 aaKnown RBP17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 FASTKD3Q14CZ7 662 aaKnown RBP17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 BEX5Q5H9J7 111 aa17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 OR52E8Q6IFG1 317 aa17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 PLCZ1Q86YW0 608 aa17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 LILRB1Q8NHL6 650 aaPredicted RBP17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 ASIC3Q9UHC3 531 aa17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 LAMP3Q9UQV4 416 aa17.12■□□□□ 0.33
HMGCS1-206ENST00000511774 EMC8O43402 210 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms