RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 TTMPQ5BVD1 217 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 CT45A2Q5DJT8 189 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 CMPK2Q5EBM0 449 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 IL23RQ5VWK5 629 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 HLA-DQA1Q5Y7H0 255 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 SLC22A10Q63ZE4 541 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 ANKRD26P1Q6NSI1 321 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 GFRALQ6UXV0 394 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 BNC2Q6ZN30 1099 aaPredicted RBP10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 Q6ZPB1 254 aaPredicted RBP10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 HDXQ7Z353 690 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 FGD2Q7Z6J4 655 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 RIMKLAQ8IXN7 391 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 FAM9CQ8IZT9 166 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 KIRREL3Q8IZU9 778 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 CLHC1Q8NHS4 586 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 CDC26Q8NHZ8 85 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 RAB3IL1Q8TBN0 382 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 HOXB13Q92826 284 aaPredicted RBP10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 GFM2Q969S9 779 aaKnown RBP10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 RELTQ969Z4 430 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 TUBGCP3Q96CW5 907 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 COQ8BQ96D53 544 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 MTERF3Q96E29 417 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 ELP4Q96EB1 424 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 HSPBAP1Q96EW2 488 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 LCORQ96JN0 433 aaPredicted RBP10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 PSMG3-AS1Q96PY0 264 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 BTBD9Q96Q07 612 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 BBS4Q96RK4 519 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 SECISBP2Q96T21 854 aaKnown RBP10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 PAIP2Q9BPZ3 127 aaKnown RBP10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 FAM173AQ9BQD7 235 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 AKTIPQ9H8T0 292 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 ZDHHC11Q9H8X9 412 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 PFDN4Q9NQP4 134 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 SACM1LQ9NTJ5 587 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 ACSS1Q9NUB1 689 aaPredicted RBP10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 PNPOQ9NVS9 261 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 THAP1Q9NVV9 213 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 ASIC5Q9NY37 505 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 CNIH4Q9P003 139 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 SEC14L3Q9UDX4 400 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 BCAP29Q9UHQ4 241 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 ERRFI1Q9UJM3 462 aaPredicted RBP10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 NPIPA1Q9UND3 350 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 OSGIN2Q9Y236 505 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 COL12A1Q99715 3063 aa10.81□□□□□ -0.68
HMGXB3-203ENST00000510472 HIVEP3Q5T1R4 2406 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 SVILO95425 2214 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 LRRK2Q5S007 2527 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 FRG2CA6NGY1 282 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 G3V3Y1 287 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 KLF11O14901 512 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 AKAP10O43572 662 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 LRATO95237 230 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 RNF224P0DH78 156 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 G6PDP11413 515 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 ABCD3P28288 659 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 MAPK1P28482 360 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 PIGAP37287 484 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 RFC3P40938 356 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 MAP3K8P41279 467 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 FBXW4P57775 412 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 PSG6Q00889 435 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 OCRLQ01968 901 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 ELOAQ14241 798 aaKnown RBP10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 MLC1Q15049 377 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 PDCD2Q16342 344 aaPredicted RBP10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 C6orf163Q5TEZ5 329 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 TMEM81Q6P7N7 255 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 NPSR1Q6W5P4 371 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 RGS9BPQ6ZS82 235 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 LARP4Q71RC2 724 aaKnown RBP eCLIP10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 ZNF551Q7Z340 670 aaPredicted RBP10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 LURAP1LQ8IV03 231 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 LRRC34Q8IZ02 419 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 FBXW8Q8N3Y1 598 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 LIX1Q8N485 282 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 FNDC5Q8NAU1 212 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 OR52N2Q8NGI0 321 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 SPPL2AQ8TCT8 520 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 NUDT8Q8WV74 236 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 HGDQ93099 445 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 CIDECQ96AQ7 238 aaPredicted RBP10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 PPCDCQ96CD2 204 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 ATP6V1G3Q96LB4 118 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 TTTY12Q9BZ98 90 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 TSPAN10Q9H1Z9 355 aaPredicted RBP10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 MEAF6Q9HAF1 191 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 IL1RL2Q9HB29 575 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 NKIRAS1Q9NYS0 192 aa10.8□□□□□ -0.68
HMGXB3-203ENST00000510472 LRRC3CA6NJW4 275 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 CAPN14A8MX76 684 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 SCAMP2O15127 329 aaKnown RBP10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 PDPK1O15530 556 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 HS6ST1O60243 411 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 TRIM3O75382 744 aaPredicted RBP10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 PPM1BO75688 479 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms