RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ZFP64Q9NPA5 681 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 DNAJB12Q9NXW2 375 aaKnown RBP9.99□□□□□ -0.81
RNF4-212ENST00000509258 Q9UFV3 132 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 ZNF639Q9UID6 485 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 ABCA2Q9BZC7 2435 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 CDH16O75309 829 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 ERAL1O75616 437 aaKnown RBP9.98□□□□□ -0.81
RNF4-212ENST00000509258 IL3P08700 152 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 PORP16435 677 aaPredicted RBP9.98□□□□□ -0.81
RNF4-212ENST00000509258 PCSK2P16519 638 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 IMPDH1P20839 514 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 ABCD3P28288 659 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 PRKAA2P54646 552 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 NRG3P56975 720 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 PPP2R2AP63151 447 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 DCST1Q5T197 706 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 TMEM198Q66K66 360 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 ARSKQ6UWY0 536 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 GPRIN3Q6ZVF9 776 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 TGIF2LYQ8IUE0 185 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 IFT20Q8IY31 132 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 ZZZ3Q8IYH5 903 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 PM20D2Q8IYS1 436 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 CEP112Q8N8E3 955 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 SPPL2AQ8TCT8 520 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 CTHRC1Q96CG8 243 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 L3HYPDHQ96EM0 354 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 RMND5BQ96G75 393 aaPredicted RBP9.98□□□□□ -0.81
RNF4-212ENST00000509258 ZNF597Q96LX8 424 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 JSRP1Q96MG2 331 aaPredicted RBP9.98□□□□□ -0.81
RNF4-212ENST00000509258 RILPQ96NA2 401 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 NODALQ96S42 347 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 DOHHQ9BU89 302 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 EBPLQ9BY08 206 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 POLDIP3Q9BY77 421 aaKnown RBP9.98□□□□□ -0.81
RNF4-212ENST00000509258 BRINP2Q9C0B6 783 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 CLEC4MQ9H2X3 399 aaPredicted RBP9.98□□□□□ -0.81
RNF4-212ENST00000509258 UBQLN3Q9H347 655 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 BRF2Q9HAW0 419 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 ACKR4Q9NPB9 350 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 EHD3Q9NZN3 535 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 FOXD3Q9UJU5 478 aaPredicted RBP9.98□□□□□ -0.81
RNF4-212ENST00000509258 PLLPQ9Y342 182 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 NPFFR2Q9Y5X5 522 aa9.98□□□□□ -0.81
RNF4-212ENST00000509258 ZNF469Q96JG9 3925 aaPredicted RBP9.98□□□□□ -0.81
RNF4-212ENST00000509258 ACANP16112 2415 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 C1orf226A1L170 272 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 C2orf72A6NCS6 295 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 AHRRA9YTQ3 701 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 DVL2O14641 736 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 PROCP04070 461 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 ATP1B1P05026 303 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 ABCB1P08183 1280 aaPredicted RBP9.97□□□□□ -0.81
RNF4-212ENST00000509258 KRT15P19012 456 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 ATP5F1P24539 256 aaPredicted RBP9.97□□□□□ -0.81
RNF4-212ENST00000509258 GCKP35557 465 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 KIR2DL3P43628 341 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 SLCO1A2P46721 670 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 ALDH9A1P49189 494 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 EMDP50402 254 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 DLX5P56178 289 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 MAP4K2Q12851 820 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 SNTB1Q13884 538 aaKnown RBP9.97□□□□□ -0.81
RNF4-212ENST00000509258 RPS6KA2Q15349 733 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 PAGE2Q7Z2X7 111 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 VWA5B2Q8N398 1253 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 NAXEQ8NCW5 288 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 EPS8L3Q8TE67 593 aaKnown RBP9.97□□□□□ -0.81
RNF4-212ENST00000509258 C16orf78Q8WTQ4 265 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 DIO2Q92813 273 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 KAT2AQ92830 837 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 HGDQ93099 445 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 TP53INP1Q96A56 240 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 KLHL29Q96CT2 875 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 MTBPQ96DY7 904 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 DTNBP1Q96EV8 351 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 GNRHR2Q96P88 292 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 GPATCH1Q9BRR8 931 aaKnown RBP9.97□□□□□ -0.81
RNF4-212ENST00000509258 CCM2LQ9NUG4 571 aaPredicted RBP9.97□□□□□ -0.81
RNF4-212ENST00000509258 PSMC3IPQ9P2W1 217 aaPredicted RBP9.97□□□□□ -0.81
RNF4-212ENST00000509258 VPS29Q9UBQ0 182 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 ST6GALNAC2Q9UJ37 374 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 SNX6Q9UNH7 406 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 EXO1Q9UQ84 846 aaKnown RBP9.97□□□□□ -0.81
RNF4-212ENST00000509258 DLGAP4Q9Y2H0 992 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 PTGDR2Q9Y5Y4 395 aa9.97□□□□□ -0.81
RNF4-212ENST00000509258 MAP1AP78559 2803 aaPredicted RBP9.97□□□□□ -0.81
RNF4-212ENST00000509258 NIPBLQ6KC79 2804 aaeCLIP9.97□□□□□ -0.81
RNF4-212ENST00000509258 FLNAP21333 2647 aaKnown RBP9.96□□□□□ -0.81
RNF4-212ENST00000509258 C15orf38-AP3S2A0A0A6YYH1 394 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 ANKRD33BA6NCL7 494 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 SMIM23A6NLE4 172 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 KIF2AO00139 706 aaPredicted RBP9.96□□□□□ -0.82
RNF4-212ENST00000509258 PCDH7O60245 1069 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 UGT2B11O75310 529 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 SNX4O95219 450 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 KLK2P20151 261 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 GDF1P27539 372 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 CASP3P42574 277 aa9.96□□□□□ -0.82
RNF4-212ENST00000509258 MASP1P48740 699 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms