RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 C21orf58P58505 322 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 HILS1P60008 231 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 IL2P60568 153 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 RPL11P62913 178 aaKnown RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 IRX1P78414 480 aaPredicted RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 LSAMPQ13449 338 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 SERTAD2Q14140 314 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 EFTUD2Q15029 972 aaKnown RBP eCLIP3.45□□□□□ -1.861e-6■■■■□ 21
RNF4-211ENST00000509206 ACAP2Q15057 778 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 RBBP5Q15291 538 aaKnown RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 KRT31Q15323 416 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 TPSAB1Q15661 275 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 SGCBQ16585 318 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 CTU2Q2VPK5 515 aaKnown RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 TTLL9Q3SXZ7 439 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 VAX1Q5SQQ9 334 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 SBSNQ6UWP8 590 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 ANGPTL8Q6UXH0 198 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 LHFPL2Q6ZUX7 228 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 MICALCLQ6ZW33 695 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 USP43Q70EL4 1123 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 ZNF571Q7Z3V5 609 aaPredicted RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 LRRC6Q86X45 466 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 ZDHHC13Q8IUH4 622 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 PALM2Q8IXS6 379 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 ZNF595Q8IYB9 648 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 UBQLNLQ8IYU4 475 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 CA13Q8N1Q1 262 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 ZNF619Q8N2I2 560 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 MUC15Q8N387 334 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 SVOPLQ8N434 492 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 ZNF321PQ8N8H1 164 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 C7orf57Q8NEG2 295 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 KBTBD8Q8NFY9 601 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 LILRB1Q8NHL6 650 aaPredicted RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 NUBPLQ8TB37 319 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 SLC2A12Q8TD20 617 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 UTP15Q8TED0 518 aaKnown RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 PTPMT1Q8WUK0 201 aaPredicted RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 HSD17B8Q92506 261 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 CCT6BQ92526 530 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 FAM136AQ96C01 138 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 HAUS1Q96CS2 278 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 RBM18Q96H35 190 aaKnown RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 HRASLS5Q96KN8 279 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 DOCK7Q96N67 2140 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 SFXN2Q96NB2 322 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 TRMOQ9BU70 441 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 SUCNR1Q9BXA5 334 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 HDHD5Q9BXW7 423 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 KRTAP17-1Q9BYP8 105 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 STMN4Q9H169 189 aaPredicted RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 ISCUQ9H1K1 167 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 METTL7AQ9H8H3 244 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 IPPKQ9H8X2 491 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 ACTR8Q9H981 624 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 UNKLQ9H9P5 680 aaKnown RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 ARNT2Q9HBZ2 717 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 PROK2Q9HC23 129 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 CBLN4Q9NTU7 201 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 ERVK13-1Q9NX77 482 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 TEX10Q9NXF1 929 aaPredicted RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 TAS2R10Q9NYW0 307 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 CLCF1Q9UBD9 225 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 ING1Q9UK53 422 aaPredicted RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 CNOT11Q9UKZ1 510 aaKnown RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 R3HDM2Q9Y2K5 976 aaKnown RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 ZKSCAN5Q9Y2L8 839 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.45□□□□□ -1.86
RNF4-211ENST00000509206 CHCHD2Q9Y6H1 151 aaPredicted RBP3.45□□□□□ -1.86
RNF4-211ENST00000509206 IKBKGQ9Y6K9 419 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 SPACA6W5XKT8 324 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 NINQ8N4C6 2090 aa3.45□□□□□ -1.86
RNF4-211ENST00000509206 TRRAPQ9Y4A5 3859 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 IGHV4-61A0A0C4DH41 118 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 LOC390937A0A1W2PQ73 354 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 MACROD2A1Z1Q3 448 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 C7orf72A4D263 438 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 LRRC53A6NM62 1247 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 H3BMM5 538 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 M0QZ24 198 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 EIF3FO00303 357 aaPredicted RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 SCAMP2O15127 329 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 CD3EAPO15446 510 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 PSMD3O43242 534 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 NPHS1O60500 1241 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 PSIP1O75475 530 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 CBR3O75828 277 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 TGFB1P01137 390 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 HIST1H2AGP0C0S8 130 aaPredicted RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 HKR1P10072 659 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 ERGP11308 486 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 CDH1P12830 882 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 PEPDP12955 493 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 ZNF23P17027 643 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 HIST1H2ADP20671 130 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 TCEA1P23193 301 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 CCND1P24385 295 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 MGAT1P26572 445 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms