RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 HCFC1P51610 2035 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 AQP7O14520 342 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 GNB5O14775 395 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 BCKDKO14874 412 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 TRAPPC6AO75865 159 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 ENDOUP21128 410 aaKnown RBP13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 ACVR2AP27037 513 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 KIR3DL1P43629 444 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 C2orf80Q0P641 193 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 PLCXD2Q0VAA5 305 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 HEPACAMQ14CZ8 416 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 TOMM20Q15388 145 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 TMEM211Q6ICI0 200 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 C10orf107Q8IVU9 208 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 LIX1Q8N485 282 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 OR10Q1Q8NGQ4 319 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 RDH11Q8TC12 318 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 RND1Q92730 232 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 OMA1Q96E52 524 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 UCK2Q9BZX2 261 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 IQCGQ9H095 443 aaKnown RBP13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 METTL7AQ9H8H3 244 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 PPCSQ9HAB8 311 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 GIMAP4Q9NUV9 329 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 OXSMQ9NWU1 459 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 SENP1Q9P0U3 644 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 ZNF639Q9UID6 485 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 APCP25054 2843 aa13.58□□□□□ -0.24
UBE2D3-228ENST00000508974 FBN2P35556 2912 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 DCHS2Q6V1P9 2916 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 CSMD1Q96PZ7 3565 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 C15orf38-AP3S2A0A0A6YYH1 394 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 A0A1B0GVC2 190 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 OR14I1A6ND48 311 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 FIGNL2A6NMB9 653 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 SUSD5O60279 629 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 TRIM3O75382 744 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 PPM1BO75688 479 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 DRD2P14416 443 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 CASP3P42574 277 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 EMDP50402 254 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 DNAJB13P59910 316 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 IFFO1Q0D2I5 559 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 ZNF763Q0D2J5 394 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 PCLAFQ15004 111 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 PRSS53Q2L4Q9 553 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 ZNF628Q5EBL2 1059 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 TBCELQ5QJ74 424 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 WLSQ5T9L3 541 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 LIPMQ5VYY2 423 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 CNPY4Q8N129 248 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 SARAFQ96BY9 339 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 CTHRC1Q96CG8 243 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 LCORQ96JN0 433 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 GNRHR2Q96P88 292 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 BBS4Q96RK4 519 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 NODALQ96S42 347 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 RUBCNLQ9H714 662 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 SLC35C2Q9NQQ7 365 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 CFL2Q9Y281 166 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 FAM215AQ9Y5M1 114 aa13.57□□□□□ -0.24
UBE2D3-228ENST00000508974 PKDREJQ9NTG1 2253 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 HCN1O60741 890 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 SPAG7O75391 227 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 JUNP05412 331 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 ABCB1P08183 1280 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 CORO7P57737 925 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 RPP38P78345 283 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 SLC18A2Q05940 514 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 ERCC6LQ2NKX8 1250 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 RTL6Q6ICC9 239 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 B3GNT6Q6ZMB0 384 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 PACS2Q86VP3 889 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 TICAM1Q8IUC6 712 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 FAM9CQ8IZT9 166 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 C17orf47Q8NEP4 570 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 NEIL3Q8TAT5 605 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 C11orf24Q96F05 449 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 APOPT1Q96IL0 206 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 TTYH2Q9BSA4 534 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 MECRQ9BV79 373 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 ANGPTL4Q9BY76 406 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 GALNT9Q9HCQ5 603 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 MIEF1Q9NQG6 463 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 KLRF1Q9NZS2 232 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 PRODH2Q9UF12 536 aa13.56□□□□□ -0.24
UBE2D3-228ENST00000508974 SERTM1A2A2V5 107 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 ANKRD33BA6NCL7 494 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 UGT2B11O75310 529 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 SEC22BO75396 215 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 GLI4P10075 376 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 UROSP10746 265 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 DDCP20711 480 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 CHRNB4P30926 498 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 NCBP2P52298 156 aaKnown RBP eCLIP13.55□□□□□ -0.243e-11■■□□□ 12.6
UBE2D3-228ENST00000508974 ZNF155Q12901 538 aaPredicted RBP13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 C1orf185Q5T7R7 199 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 FNDC7Q5VTL7 733 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 NOXRED1Q6NXP6 359 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms