RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 COL12A1Q99715 3063 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 PINLYPA6NC86 204 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 E9PLN8 166 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 PLOD2O00469 737 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 SUSD5O60279 629 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 CDC40O60508 579 aaKnown RBP eCLIP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 PPM1BO75688 479 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 SERPINE1P05121 402 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 LINC00032P0C843 101 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 RNF224P0DH78 156 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 PTGER1P34995 402 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 DNASE1L1P49184 302 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 NCBP2P52298 156 aaKnown RBP eCLIP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 RPL38P63173 70 aaKnown RBP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 MRPS22P82650 360 aaKnown RBP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 MRPS35P82673 323 aaKnown RBP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 DUSP2Q05923 314 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 PLCXD2Q0VAA5 305 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 SNTA1Q13424 505 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 EXOSC7Q15024 291 aaKnown RBP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 LTB4RQ15722 352 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 C3AR1Q16581 482 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 ATP6AP1LQ52LC2 224 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 XKR7Q5GH72 579 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 TMEM198Q66K66 360 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 ZCCHC23Q6ZST2 131 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 R3HCC1LQ7Z5L2 792 aaKnown RBP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 ZNF808Q8N4W9 903 aaPredicted RBP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 TMEM251Q8N6I4 163 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 ZFP28Q8NHY6 868 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 FAM57AQ8TBR7 257 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 SPPL2AQ8TCT8 520 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 DTNBP1Q96EV8 351 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 ZNF597Q96LX8 424 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 VKORC1Q9BQB6 163 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 ITPAQ9BY32 194 aa18.28■□□□□ 0.52
SFXN1-209ENST00000508290 TUBA8Q9NY65 449 aaPredicted RBP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 GPR55Q9Y2T6 319 aaPredicted RBP18.28■□□□□ 0.52
SFXN1-209ENST00000508290 SPTBN1Q01082 2364 aaKnown RBP18.27■□□□□ 0.52
SFXN1-209ENST00000508290 SVILO95425 2214 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 A0A0G2JMM0 328 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 A0A1B0GTH9 108 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 A0A1W2PPB8 328 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 A0A1W2PRS3 328 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 TTC36A6NLP5 189 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 FAM166BA8MTA8 275 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 KIR3DP1A8MWS1 328 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 BCKDKO14874 412 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 PIP5K1BO14986 540 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 HCN1O60741 890 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 ZG16O60844 167 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 HSPA4LO95757 839 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 DHRS4L1P0CG22 281 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 SOX18P35713 384 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 PIGAP37287 484 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 SLC10A1Q14973 349 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 RFTN2Q52LD8 501 aaPredicted RBP18.27■□□□□ 0.52
SFXN1-209ENST00000508290 FAM180BQ6P0A1 224 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 XKRXQ6PP77 449 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 PACS2Q86VP3 889 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 CHERPQ8IWX8 916 aaKnown RBP18.27■□□□□ 0.52
SFXN1-209ENST00000508290 SLC34A3Q8N130 599 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 NATD1Q8N6N6 113 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 OR52N2Q8NGI0 321 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 OR2T11Q8NH01 316 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 CCDC120Q96HB5 630 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 PKNOX2Q96KN3 472 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 ANGPTL4Q9BY76 406 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 REEP4Q9H6H4 257 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 ZNF703Q9H7S9 590 aaPredicted RBP18.27■□□□□ 0.52
SFXN1-209ENST00000508290 TINAGQ9UJW2 476 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 MEMO1Q9Y316 297 aa18.27■□□□□ 0.52
SFXN1-209ENST00000508290 A0A1B0GVC2 190 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 OR6C70A6NIJ9 312 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 G3V3Y1 287 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 ERN1O75460 977 aaKnown RBP18.26■□□□□ 0.51
SFXN1-209ENST00000508290 WISP2O76076 250 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 ABCB1P08183 1280 aaPredicted RBP18.26■□□□□ 0.51
SFXN1-209ENST00000508290 SDC1P18827 310 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 ELAVL4P26378 380 aaKnown RBP18.26■□□□□ 0.51
SFXN1-209ENST00000508290 KRT20P35900 424 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 FBXW4P57775 412 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 DUSP8Q13202 625 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 MAD2L1Q13257 205 aaPredicted RBP18.26■□□□□ 0.51
SFXN1-209ENST00000508290 ART3Q13508 389 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 PRAMEF20Q5VT98 475 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 DOLPP1Q86YN1 238 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 PPCDCQ96CD2 204 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 OMA1Q96E52 524 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 ZBED6CLQ96FA7 236 aaPredicted RBP18.26■□□□□ 0.51
SFXN1-209ENST00000508290 VSTM2LQ96N03 204 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 AMDHD1Q96NU7 426 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 TP63Q9H3D4 680 aaPredicted RBP18.26■□□□□ 0.51
SFXN1-209ENST00000508290 ACKR4Q9NPB9 350 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 EXO1Q9UQ84 846 aaKnown RBP18.26■□□□□ 0.51
SFXN1-209ENST00000508290 DTX4Q9Y2E6 619 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 PTGDR2Q9Y5Y4 395 aa18.26■□□□□ 0.51
SFXN1-209ENST00000508290 TMEM233B4DJY2 109 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 AQP7O14520 342 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms