RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TSTA3Q13630 321 aaPredicted RBP4.93□□□□□ -1.62
HERC4-213ENST00000506515 OR1C1Q15619 314 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 PRAMEF7Q5VXH5 474 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 MFSD14CQ5VZR4 134 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 NEPROQ6NW34 567 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 Q7L0L9 218 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 ZFAND4Q86XD8 727 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 WDR49Q8IV35 697 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 OR4N5Q8IXE1 308 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 CERS5Q8N5B7 392 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 GTF3AQ92664 365 aaKnown RBP4.93□□□□□ -1.62
HERC4-213ENST00000506515 MRPL53Q96EL3 112 aaKnown RBP4.93□□□□□ -1.62
HERC4-213ENST00000506515 MOCOSQ96EN8 888 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 PRICKLE1Q96MT3 831 aaPredicted RBP4.93□□□□□ -1.62
HERC4-213ENST00000506515 TMEM237Q96Q45 408 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 RUFY1Q96T51 708 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 LGMNQ99538 433 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 FUNDC2Q9BWH2 189 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 ABCG8Q9H221 673 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 CARD9Q9H257 536 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 TMEM245Q9H330 911 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 ANO10Q9NW15 660 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 THAP10Q9P2Z0 257 aaPredicted RBP4.93□□□□□ -1.62
HERC4-213ENST00000506515 IL19Q9UHD0 177 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 DNAH12Q6ZR08 3092 aa4.93□□□□□ -1.62
HERC4-213ENST00000506515 TTC28Q96AY4 2481 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 RPAP1Q9BWH6 1393 aaPredicted RBP4.92□□□□□ -1.62
HERC4-213ENST00000506515 DLG5Q8TDM6 1919 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 IGHV3-38A0A0C4DH36 116 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 TRBV2A0A0J9YWF9 115 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 SH3PXD2BA1X283 911 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 OR5H15A6NDH6 313 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 C19orf81C9J6K1 198 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 H7C423 109 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 SFTPBP07988 381 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 RNF224P0DH78 156 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 ADORA3P0DMS8 318 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 CT45A8P0DMV1 189 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 CT45A9P0DMV2 189 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 GLRA1P23415 457 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 FCGR2BP31994 310 aaPredicted RBP4.92□□□□□ -1.62
HERC4-213ENST00000506515 FCGR2CP31995 323 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 ID1P41134 155 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 LUMP51884 338 aaPredicted RBP4.92□□□□□ -1.62
HERC4-213ENST00000506515 HNRNPFP52597 415 aaKnown RBP4.92□□□□□ -1.62
HERC4-213ENST00000506515 MEF2DQ14814 521 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 TRADDQ15628 312 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 UPP1Q16831 310 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 KNOP1Q1ED39 458 aaKnown RBP4.92□□□□□ -1.62
HERC4-213ENST00000506515 TAF1BQ53T94 588 aaPredicted RBP4.92□□□□□ -1.62
HERC4-213ENST00000506515 C2CD6Q53TS8 623 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 CT45A2Q5DJT8 189 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 KCNMB4Q86W47 210 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 CCNYQ8ND76 341 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 EXOC6Q8TAG9 804 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 SLCO4A1Q96BD0 722 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 DDX47Q9H0S4 455 aaKnown RBP4.92□□□□□ -1.62
HERC4-213ENST00000506515 GANQ9H2C0 597 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 CXXC4Q9H2H0 198 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 ACOXLQ9NUZ1 547 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 TECRQ9NZ01 308 aaKnown RBP4.92□□□□□ -1.62
HERC4-213ENST00000506515 KIF16BQ96L93 1317 aa4.92□□□□□ -1.62
HERC4-213ENST00000506515 MYH3P11055 1940 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 SLC9B1P1A6NJY1 282 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 EEF2KO00418 725 aaKnown RBP4.91□□□□□ -1.62
HERC4-213ENST00000506515 KIAA0513O60268 411 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 OR6A2O95222 327 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 TXNDC12O95881 172 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 PCP11498 1178 aaKnown RBP4.91□□□□□ -1.62
HERC4-213ENST00000506515 RPL9P32969 192 aaKnown RBP4.91□□□□□ -1.62
HERC4-213ENST00000506515 SLC12A3P55017 1021 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 SRP54P61011 504 aaKnown RBP4.91□□□□□ -1.62
HERC4-213ENST00000506515 WASHC5Q12768 1159 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 ECSCRQ19T08 205 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 MS4A18Q3C1V0 323 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 EPC2Q52LR7 807 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 DCAF12Q5T6F0 453 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 ZNF613Q6PF04 617 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 C17orf64Q86WR6 236 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 TBC1D10CQ8IV04 446 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 BATF2Q8N1L9 274 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 TMEM185AQ8NFB2 350 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 OR8H1Q8NGG4 311 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 OR6M1Q8NGM8 313 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 MRPL24Q96A35 216 aaKnown RBP4.91□□□□□ -1.62
HERC4-213ENST00000506515 ZNF599Q96NL3 588 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 ALKBH3Q96Q83 286 aaPredicted RBP4.91□□□□□ -1.62
HERC4-213ENST00000506515 TNFRSF13CQ96RJ3 184 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 TRIM51Q9BSJ1 452 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 SLC26A1Q9H2B4 701 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 PARLQ9H300 379 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 WDR41Q9HAD4 459 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 SYTL2Q9HCH5 934 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 GDF3Q9NR23 364 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 TSPAN16Q9UKR8 245 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 CACNA1FO60840 1977 aa4.91□□□□□ -1.62
HERC4-213ENST00000506515 DOCK3Q8IZD9 2030 aa4.9□□□□□ -1.62
HERC4-213ENST00000506515 MGAMO43451 1857 aa4.9□□□□□ -1.62
HERC4-213ENST00000506515 IGHV4-30-2A0A087WSY4 118 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms