RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 NCLNQ969V3 563 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 AZIN2Q96A70 460 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 TRIM44Q96DX7 344 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 PCED1BQ96HM7 432 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 MAGED4Q96JG8 741 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 UHRF2Q96PU4 802 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 CARD6Q9BX69 1037 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 WWP1Q9H0M0 922 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 RIBC2Q9H4K1 309 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 ROPN1Q9HAT0 212 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 VAT1LQ9HCJ6 419 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF71Q9NQZ8 489 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 TECRQ9NZ01 308 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 TMOD2Q9NZR1 351 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 BCAP29Q9UHQ4 241 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 KCNG2Q9UJ96 466 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 ERRFI1Q9UJM3 462 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 DIMT1Q9UNQ2 313 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 BRCA2P51587 3418 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 SCN9AQ15858 1988 aa2.8□□□□□ -1.96
TRAPPC11-205ENST00000506426 PAPPA2Q9BXP8 1791 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 A0A087WW49 117 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 IQCMA0A1B0GVH7 501 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM230AA0A1W2PPH8 454 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 SH3PXD2BA1X283 911 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 SHISA7A6NL88 538 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF195O14628 629 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 ANGPT2O15123 496 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 SIGLEC5O15389 551 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 LRCH4O75427 683 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 TOM1L1O75674 476 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 IDH1O75874 414 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 CALCAP01258 141 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 KRT6BP04259 564 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 PCCAP05165 728 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 HOXB7P09629 217 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF853P0CG23 659 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 RRASP10301 218 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 GP9P14770 177 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 TMOD1P28289 359 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 ADSSP30520 456 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 CHRNB4P30926 498 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 TIMP3P35625 211 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 TSFMP43897 325 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 KRT6CP48668 564 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 TRPC1P48995 793 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 FHITP49789 147 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 RGS19P49795 217 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 DLX5P56178 289 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 GUCY2DQ02846 1103 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 HSF2Q03933 536 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 RAPSNQ13702 412 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 HNRNPDQ14103 355 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 RFTN2Q52LD8 501 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 AGKQ53H12 422 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 FFAR4Q5NUL3 377 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 STPG1Q5TH74 334 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 CWC27Q6UX04 472 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 AMZ2Q86W34 360 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 PARP8Q8N3A8 854 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 DENND6BQ8NEG7 585 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR5M9Q8NGP3 310 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 RPLP0P6Q8NHW5 317 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 CHPT1Q8WUD6 406 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 TCP11Q8WWU5 503 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 TMEM37Q8WXS4 190 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 TMEM45BQ96B21 275 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 EGLN1Q9GZT9 426 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 HOXD1Q9GZZ0 328 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 VPS33BQ9H267 617 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 PNNQ9H307 717 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 FNDC4Q9H6D8 234 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 MTHFD2LQ9H903 347 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 HYPKQ9NX55 129 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 AATFQ9NY61 560 aaKnown RBP eCLIP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 GTSE1Q9NYZ3 720 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 ATXN10Q9UBB4 475 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 LHX3Q9UBR4 397 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 CHMP2BQ9UQN3 213 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZHX2Q9Y6X8 837 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 PDE4DIPQ5VU43 2346 aa2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 TNRC18O15417 2968 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF609O15014 1411 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZMYM6O95789 1325 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 FANCIQ9NVI1 1328 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 A0A1B0GWJ7 208 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 A0A1W2PR80 420 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 C15orf61A6NNL5 157 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ANKRD30BLA7E2S9 258 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 LGALS8O00214 317 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 IKBKBO14920 756 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 VPS26AO75436 327 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 MTRF1O75570 445 aaKnown RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 CEACAM4O75871 244 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ANGPTL1O95841 491 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 IGLV2-11P01706 119 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 IGHEP01854 428 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 RPLP0P05388 317 aaKnown RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZCCHC18P0CG32 403 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms