RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 Q96MT0 163 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 CHRNA10Q9GZZ6 450 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 SLC38A1Q9H2H9 487 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 MTHFD2LQ9H903 347 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 IL21RQ9HBE5 538 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 EVA1BQ9NVM1 165 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 PSORS1C1Q9UIG5 152 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 A4GNTQ9UNA3 340 aa16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 SNRNP200O75643 2136 aaKnown RBP16.21■□□□□ 0.19
TRAPPC11-204ENST00000505676 LOC105369274A0A096LPK9 316 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 LOC102723532A0A0G2JNH3 316 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 SH3PXD2BA1X283 911 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 WASHC1A8K0Z3 465 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 GPR75O95800 540 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 GASTP01350 101 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 TBCEQ15813 527 aaPredicted RBP16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 ZNF750Q32MQ0 723 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 ARHGAP11BQ3KRB8 267 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 LEXMQ3ZCV2 418 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 ZNF311Q5JNZ3 666 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 KLHL17Q6TDP4 642 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 OR4N4Q8N0Y3 316 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 DNAJC22Q8N4W6 341 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 CAMKK1Q8N5S9 505 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 C19orf47Q8N9M1 422 aaKnown RBP16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 C9orf43Q8TAL5 461 aaPredicted RBP16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 STACQ99469 402 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 POLE3Q9NRF9 147 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 CNOT2Q9NZN8 540 aaKnown RBP16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 ERVK-18Q9QC07 812 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 WARS2Q9UGM6 360 aaKnown RBP16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 ENPP5Q9UJA9 477 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 ZNF232Q9UNY5 417 aa16.21■□□□□ 0.18
TRAPPC11-204ENST00000505676 TRBV4-1A0A0J9YWV2 114 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 A0A1W2PR77 199 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 CLCA1A8K7I4 914 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 OR10H3O60404 316 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 GABRB1P18505 474 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 ACVR2AP27037 513 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 LSSP48449 732 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 PTGES3Q15185 160 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 ZNF628Q5EBL2 1059 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 COL13A1Q5TAT6 717 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 VANGL1Q8TAA9 524 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 HLA-CQ95604 372 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 TCTN2Q96GX1 697 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 SH3GL3Q99963 347 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 PIGUQ9H490 435 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 ANKHQ9HCJ1 492 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 DUSP22Q9NRW4 184 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 RASSF1Q9NS23 344 aa16.2■□□□□ 0.18
TRAPPC11-204ENST00000505676 EFCAB10A6NFE3 127 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 UBXN7O94888 489 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 THBS1P07996 1170 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 GUSBP08236 651 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 CHMP24386 653 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 CTSKP43235 329 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 EXOSC6Q5RKV6 272 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 UBE2UQ5VVX9 321 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 SLC36A4Q6YBV0 504 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 LINC00299Q6ZSB3 139 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 CDRT4Q8N9R6 151 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 OR7G2Q8NG99 324 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 GTPBP3Q969Y2 492 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 C16orf58Q96GQ5 468 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 COPS4Q9BT78 406 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 CLN6Q9NWW5 311 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 CA14Q9ULX7 337 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 CYR61O00622 381 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 CDH3P22223 829 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 CALRP27797 417 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 IDH2P48735 452 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 SNRPGP62308 76 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 LARS2Q15031 903 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 SLX4IPQ5VYV7 408 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 PGBD2Q6P3X8 592 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 PEX5LQ8IYB4 626 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 CA13Q8N1Q1 262 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 SLC38A4Q969I6 547 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 YIPF4Q9BSR8 244 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 ACOT13Q9NPJ3 140 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 NECTIN3Q9NQS3 549 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 DOLKQ9UPQ8 538 aa16.19■□□□□ 0.18
TRAPPC11-204ENST00000505676 B4DGG1 531 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 SLC22A1O15245 554 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 COQ9O75208 318 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 NME6O75414 186 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 GABARAPO95166 117 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 ATE1O95260 518 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 MT-ND2P03891 347 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 EIF2S1P05198 315 aaKnown RBP16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 CELA2BP08218 269 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 ALPPL2P10696 532 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 PIPP12273 146 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 CAPZBP47756 277 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 GP2P55259 537 aaKnown RBP16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 SIM1P81133 766 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 NFATC3Q12968 1075 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 LTB4RQ15722 352 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 FHL5Q5TD97 284 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms