RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SLC38A3Q99624 504 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 MAP3K3Q99759 626 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 TUBA1CQ9BQE3 449 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 PAK1IP1Q9NWT1 392 aaPredicted RBP20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 CALML5Q9NZT1 146 aa20.01■□□□□ 0.79
UBE2D3-216ENST00000503742 DUXAA6NLW8 204 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 SGK494L7N484 410 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 CASC3O15234 703 aaKnown RBP20■□□□□ 0.79
UBE2D3-216ENST00000503742 LDB3O75112 727 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 NME6O75414 186 aaPredicted RBP20■□□□□ 0.79
UBE2D3-216ENST00000503742 GPR75O95800 540 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 ID2Q02363 134 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 DEF8Q6ZN54 512 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 PARP8Q8N3A8 854 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 SIMC1Q8NDZ2 872 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 DTNBP1Q96EV8 351 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 FUZQ9BT04 418 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 PINK1Q9BXM7 581 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 A4GNTQ9UNA3 340 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 THADAQ6YHU6 1953 aa20■□□□□ 0.79
UBE2D3-216ENST00000503742 SPAG17Q6Q759 2223 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 FAM227AF5H4B4 570 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 SRPX2O60687 465 aaPredicted RBP19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 ELAVL4P26378 380 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 GGT2P36268 569 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 RAB38P57729 211 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 CHRNEQ04844 493 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 DEFB133Q30KQ1 61 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 FAM214AQ32MH5 1076 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 TAGAPQ8N103 731 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 SLC16A11Q8NCK7 471 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 ADAMTS15Q8TE58 950 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 TCTN2Q96GX1 697 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 ZNF556Q9HAH1 456 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 AASSQ9UDR5 926 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 C19orf53Q9UNZ5 99 aaPredicted RBP19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 M0R3H8 397 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 STK25O00506 426 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 XPNPEP2O43895 674 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 GASTP01350 101 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 H1F0P07305 194 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 FMO3P31513 532 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 SLC5A2P31639 672 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 CXCL12P48061 93 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 CSNK1EP49674 416 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 NEDD8Q15843 81 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 PROX2Q3B8N5 592 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 EXOSC6Q5RKV6 272 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 ATAD3BQ5T9A4 648 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 Q6ZPB1 254 aaPredicted RBP19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 WDR53Q7Z5U6 358 aaPredicted RBP19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 ENTHD1Q8IYW4 607 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 AQP11Q8NBQ7 271 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 UBE2FQ969M7 185 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 DUSP21Q9H596 190 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 CXorf21Q9HAI6 301 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 ANKHQ9HCJ1 492 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 SLC9A8Q9Y2E8 581 aa19.99■□□□□ 0.79
UBE2D3-216ENST00000503742 A0A087WV62 115 aa19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 PCDHGA12O60330 932 aa19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 RDH16O75452 317 aa19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 WBP4O75554 376 aaKnown RBP19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 ZIC2O95409 532 aaPredicted RBP19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 AGR2O95994 175 aa19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 IFI6P09912 130 aa19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 GABRA4P48169 554 aa19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 TRMT12Q53H54 448 aaKnown RBP19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 HMGN2P46Q86SG4 172 aa19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 OR9A4Q8NGU2 314 aa19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 APH1BQ8WW43 257 aa19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 ANKRD9Q96BM1 317 aaPredicted RBP19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 ZNF285Q96NJ3 590 aa19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 QRSL1Q9H0R6 528 aaKnown RBP19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 TP53BP1Q12888 1972 aaPredicted RBP19.98■□□□□ 0.79
UBE2D3-216ENST00000503742 ZNF701M0R085 212 aaPredicted RBP19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 SYT5O00445 386 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 PLOD3O60568 738 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 SDC3O75056 442 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 PIAS2O75928 621 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 SLITRK5O94991 958 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 OXSR1O95747 527 aaPredicted RBP19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 SLC35A2P78381 396 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 PIGFQ07326 219 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 LSAMPQ13449 338 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 SEC23BQ15437 767 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 C14orf28Q4W4Y0 310 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 FAM92BQ6ZTR7 304 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 C16orf62Q7Z3J2 963 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 OR6T1Q8NGN1 323 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 ZG16BQ96DA0 208 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 CNDP2Q96KP4 475 aaKnown RBP19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 FANCEQ9HB96 536 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 UCKL1Q9NWZ5 548 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 TMCC3Q9ULS5 477 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 RNF6Q9Y252 685 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 MED26O95402 600 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 ALPPP05187 535 aa19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 DCNP07585 359 aaKnown RBP19.97■□□□□ 0.79
UBE2D3-216ENST00000503742 PDX1P52945 283 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms