RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 LNX2Q8N448 690 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 TTC29Q8NA56 475 aaPredicted RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 SLC37A3Q8NCC5 494 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 DNAJA4Q8WW22 397 aaPredicted RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 RAB7BQ96AH8 199 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 SHDQ96IW2 340 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 Q96MT0 163 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 IL17FQ96PD4 163 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 TRNT1Q96Q11 434 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 BCL7BQ9BQE9 202 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 WNT5BQ9H1J7 359 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 LDAHQ9H6V9 325 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 POLE3Q9NRF9 147 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 THUMPD1Q9NXG2 353 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 CTSFQ9UBX1 484 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 RPS6KA6Q9UK32 745 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 ZFR2Q9UPR6 939 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 LIPT1Q9Y234 373 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 PCDHB11Q9Y5F2 797 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 PCYT1BQ9Y5K3 369 aaPredicted RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 KCNMB2Q9Y691 235 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 F5P12259 2224 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 CCDC88CQ9P219 2028 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 PQLC2LA1A4F0 135 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 C1orf226A1L170 272 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 TRABD2BA6NFA1 517 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 OTOL1A6NHN0 477 aaPredicted RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 TMEM229AB2RXF0 380 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 NPIPB8E9PQR5 432 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 LOC110117498-PIK3R3F6TDL0 507 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 SGCEO43556 437 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 UGDHO60701 494 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 GCM2O75603 506 aaPredicted RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 SOD1P00441 154 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 TIMP1P01033 207 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 KLK3P07288 261 aaPredicted RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 NPPBP16860 134 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 IL1RNP18510 177 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 ZP3P21754 424 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 IDSP22304 550 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 HNF4AP41235 474 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 SLC15A1P46059 708 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 RPS5P46782 204 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 CCT3P49368 545 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 P2RY4P51582 365 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 PRMT2P55345 433 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 DCDC1P59894 354 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 CSNK2BP67870 215 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 CAMK2GQ13555 558 aaPredicted RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 CLCA4Q14CN2 919 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 RGNQ15493 299 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 ETFDHQ16134 617 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 C1orf53Q5VUE5 145 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 GRHL2Q6ISB3 625 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 POMZP3Q6PJE2 187 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 TEX261Q6UWH6 196 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 CBLL1Q75N03 491 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 TRMT11Q7Z4G4 463 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 NPAS3Q8IXF0 933 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 C9orf62Q8N4C0 152 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 MRPL43Q8N983 215 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 ZNF454Q8N9F8 522 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 ZNF540Q8NDQ6 660 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 SPPL2AQ8TCT8 520 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 REPS1Q96D71 796 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 ELP4Q96EB1 424 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 FCRL1Q96LA6 429 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 DCLRE1CQ96SD1 692 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 CCM2Q9BSQ5 444 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 YIPF4Q9BSR8 244 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 REEP1Q9H902 201 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 KRT84Q9NSB2 600 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 FAM120CQ9NX05 1096 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 PLAGL1Q9UM63 463 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 CFAP20Q9Y6A4 193 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 U3KQ87 197 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 ATG2BQ96BY7 2078 aa4.89□□□□□ -1.63
CLDND1-208ENST00000503004 TCF20Q9UGU0 1960 aaKnown RBP4.89□□□□□ -1.63
CLDND1-208ENST00000503004 SLC22A23A1A5C7 686 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 DNASE2O00115 360 aaPredicted RBP4.88□□□□□ -1.63
CLDND1-208ENST00000503004 GNB5O14775 395 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 KHNYNO15037 678 aaKnown RBP4.88□□□□□ -1.63
CLDND1-208ENST00000503004 SPINT1O43278 529 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 POP7O75817 140 aaKnown RBP4.88□□□□□ -1.63
CLDND1-208ENST00000503004 AP2A2O94973 939 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 HTR3BO95264 441 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 C1orf105O95561 183 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 C6orf47O95873 294 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 MT-ND2P03891 347 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 SEMG1P04279 462 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 FHP07954 510 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 RRASP10301 218 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 CEBPBP17676 345 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 FPR1P21462 350 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 RYKP34925 604 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 VIPR2P41587 438 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 RAB13P51153 203 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 DGKEP52429 567 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 EPHA5P54756 1037 aa4.88□□□□□ -1.63
CLDND1-208ENST00000503004 C21orf58P58505 322 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms