RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 NXNL1Q96CM4 212 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 TMCO6Q96DC7 493 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 ARSGQ96EG1 525 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 JSRP1Q96MG2 331 aaPredicted RBP5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 GNRHR2Q96P88 292 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 BTBD9Q96Q07 612 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 FRG2BQ96QU4 278 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 SORBS1Q9BX66 1292 aaKnown RBP5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 RAB17Q9H0T7 212 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 HHATLQ9HCP6 504 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 SAYSD1Q9NPB0 183 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 NMRK1Q9NWW6 199 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 SIRT5Q9NXA8 310 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 TEX10Q9NXF1 929 aaPredicted RBP5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 MAT2BQ9NZL9 334 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 CLCF1Q9UBD9 225 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 PRODH2Q9UF12 536 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 NDRG3Q9UGV2 375 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 PSME2Q9UL46 239 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 PLEKHA6Q9Y2H5 1048 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 GPR55Q9Y2T6 319 aaPredicted RBP5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 UTP11Q9Y3A2 253 aaKnown RBP5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 PCDHA9Q9Y5H5 950 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 ACANP16112 2415 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 NAV3Q8IVL0 2385 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 NIPBLQ6KC79 2804 aaeCLIP5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 AKAP6Q13023 2319 aa5.56□□□□□ -1.52
LSM3P4-201ENST00000502948 A0A096LPK6 155 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 MYOCOSA0A1B0GUC4 107 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 SERTM1A2A2V5 107 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 OR7A17O14581 309 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 PGRMC2O15173 223 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TNFSF13O75888 250 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 PIAS1O75925 651 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 ACSL3O95573 720 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 ALDOAP04075 364 aaKnown RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 HEXAP06865 529 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 INHBBP09529 407 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TMIGD3P0DMS9 266 aaPredicted RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 GFAPP14136 432 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 DRD2P14416 443 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 KRT15P19012 456 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 SOX18P35713 384 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 GMPRP36959 345 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 MC3RP41968 323 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 SLCO1A2P46721 670 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TRPC1P48995 793 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 PNLIPRP2P54317 469 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 GNG11P61952 73 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 MRPS22P82650 360 aaKnown RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 GALNT1Q10472 559 aaPredicted RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TRAF3Q13114 568 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 DDX39BQ13838 428 aaKnown RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 GANABQ14697 944 aaKnown RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 SLMAPQ14BN4 828 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 CPSF6Q16630 551 aaKnown RBP eCLIP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TSNAXIP1Q2TAA8 658 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 GLYR1Q49A26 553 aaPredicted RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TECRLQ5HYJ1 363 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 CCNYL2Q5T2Q4 361 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 LCA5Q86VQ0 697 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 IFNEQ86WN2 208 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 CXorf67Q86X51 503 aaPredicted RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 PLCZ1Q86YW0 608 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 PPM1NQ8N819 430 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 FBF1Q8TES7 1133 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 CAVIN3Q969G5 261 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 ZNF681Q96N22 645 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TRIB1Q96RU8 372 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 RBM24Q9BX46 236 aaKnown RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 OSBPL11Q9BXB4 747 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TRIM31Q9BZY9 425 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TSPYL1Q9H0U9 437 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 STMN4Q9H169 189 aaPredicted RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 NXF5Q9H1B4 397 aaKnown RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 EPB41L4BQ9H329 900 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 KCNF1Q9H3M0 494 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 ELOVL5Q9NYP7 299 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 PCTPQ9UKL6 214 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 PACSIN3Q9UKS6 424 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 NFU1Q9UMS0 254 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 CAMK2AQ9UQM7 478 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 WBP11Q9Y2W2 641 aaKnown RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 SLC6A5Q9Y345 797 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 RNF11Q9Y3C5 154 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 TESMINQ9Y4I5 508 aa5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 FLNAP21333 2647 aaKnown RBP5.55□□□□□ -1.52
LSM3P4-201ENST00000502948 SH3D21A4FU49 640 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 GLOD5A6NK44 160 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 TTC36A6NLP5 189 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 WASHC1A8K0Z3 465 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 KDM4EB2RXH2 506 aaPredicted RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CASKO14936 926 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CTIFO43310 598 aaKnown RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 EMC8O43402 210 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 RAD51CO43502 376 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 PLOD3O60568 738 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 TSPAN2O60636 221 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 DIAPH2O60879 1101 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms