RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ZNF334Q9HCZ1 680 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 DYRK4Q9NR20 520 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MBNL1Q9NR56 388 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 IMP3Q9NV31 184 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GTSE1Q9NYZ3 720 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MTCH1Q9NZJ7 389 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF224Q9NZL3 707 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 BFARQ9NZS9 450 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 KCMF1Q9P0J7 381 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 COPZ2Q9P299 210 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF282Q9UDV7 671 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 LEF1Q9UJU2 399 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MOKQ9UQ07 419 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PPP2R2CQ9Y2T4 447 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ADAM18Q9Y3Q7 739 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TBL2Q9Y4P3 447 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 KLK4Q9Y5K2 254 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ARHGEF10O15013 1369 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 WDR33Q9C0J8 1336 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PTCH1Q13635 1447 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ADGRL3Q9HAR2 1447 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ANKRD50Q9ULJ7 1429 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A1B0GUH1 482 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM191CA6NGB0 347 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 FBLL1A6NHQ2 334 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ARHGEF33A8MVX0 844 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MAGEB17A8MXT2 336 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 H3BQ06 376 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 M0R296 226 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TRIM24O15164 1050 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 RNF13O43567 381 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TULP3O75386 442 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 H6PDO95479 791 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TDP2O95551 362 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 BMP15O95972 392 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 GOT2P00505 430 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ADAP00813 363 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CHRNGP07510 517 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SRPRAP08240 638 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ANXA4P09525 319 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 NBEAP1P0C6P0 100 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 STAG3L1P0CL83 205 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 AREGP15514 252 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PFKFB1P16118 471 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ZP3P21754 424 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 KLRK1P26718 216 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MARCKSP29966 332 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ERP29P30040 261 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 C21orf33P30042 268 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 OTX2P32243 289 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CA5AP35218 305 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PTGER4P35408 488 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 FDFT1P37268 417 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CEACAM6P40199 344 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SERPINB10P48595 397 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PRKXP51817 358 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT2B15P54855 530 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MLF1P58340 268 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ST8SIA6P61647 398 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 B4GALNT1Q00973 533 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SP2Q02086 613 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM115Q12893 351 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 OLIG2Q13516 323 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ENPP2Q13822 863 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF846Q147U1 533 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC17A1Q14916 467 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CSRP2Q16527 193 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SGCBQ16585 318 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 XKR6Q5GH73 641 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 KHDC1LQ5JSQ8 128 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MARC1Q5VT66 337 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 LPCAT3Q6P1A2 487 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CD300LGQ6UXG3 332 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC16A13Q7RTY0 426 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 RTN4RL2Q86UN3 420 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 WDR5BQ86VZ2 330 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 THOC6Q86W42 341 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 AMIGO1Q86WK6 493 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 KMT5CQ86Y97 462 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PHF13Q86YI8 300 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 RBFAQ8N0V3 343 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 BATF2Q8N1L9 274 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PRSS35Q8N3Z0 413 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 C17orf78Q8N4C9 275 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ZBTB2Q8N680 514 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 LILRA3Q8N6C8 439 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 EMC1Q8N766 993 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 NECAB1Q8N987 351 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 FBXL13Q8NEE6 735 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 IL17DQ8TAD2 202 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 GPX8Q8TED1 209 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 GLYATL2Q8WU03 294 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC22A17Q8WUG5 538 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PSMG2Q969U7 264 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 NARS2Q96I59 477 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 LINC00615Q96LM1 132 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 RNF2Q99496 336 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CPNE1Q99829 537 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 UTP23Q9BRU9 249 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 GGACTQ9BVM4 153 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms