RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SEM1Q6ZVN7 128 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 LIX1LQ8IVB5 337 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 ULK2Q8IYT8 1036 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 OR52R1Q8NGF1 315 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 HGDQ93099 445 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 C11orf24Q96F05 449 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-209ENST00000496445 FAIM2Q9BWQ8 316 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 BCAP29Q9UHQ4 241 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 UTS2RQ9UKP6 389 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 C15orf41Q9Y2V0 281 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 TIMM22Q9Y584 194 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 HIVEP1P15822 2718 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 ULK1O75385 1050 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 ESRRBO95718 433 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 HPNP05981 417 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 ENO1P06733 434 aaKnown RBP13.06□□□□□ -0.32
VTI1A-209ENST00000496445 ELAVL4P26378 380 aaKnown RBP13.06□□□□□ -0.32
VTI1A-209ENST00000496445 TIA1P31483 386 aaKnown RBP eCLIP13.06□□□□□ -0.32
VTI1A-209ENST00000496445 PTGDSP41222 190 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 EMDP50402 254 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 PKNOX1P55347 436 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 TLE4Q04727 773 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 CRYZQ08257 329 aaKnown RBP13.06□□□□□ -0.32
VTI1A-209ENST00000496445 SPIN4Q56A73 249 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 TMEM198Q66K66 360 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 DMRTC2Q8IXT2 367 aaPredicted RBP13.06□□□□□ -0.32
VTI1A-209ENST00000496445 LIX1Q8N485 282 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 GBP7Q8N8V2 638 aaPredicted RBP13.06□□□□□ -0.32
VTI1A-209ENST00000496445 OR10Q1Q8NGQ4 319 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 ZNF675Q8TD23 568 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 OMA1Q96E52 524 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 TMEM41AQ96HV5 264 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 LCORQ96JN0 433 aaPredicted RBP13.06□□□□□ -0.32
VTI1A-209ENST00000496445 GNRHR2Q96P88 292 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 NODALQ96S42 347 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 EBPLQ9BY08 206 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 ANKRA2Q9H9E1 313 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 KCNJ16Q9NPI9 418 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 ALKBH4Q9NXW9 302 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 EHD3Q9NZN3 535 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 CFL2Q9Y281 166 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 DLGAP4Q9Y2H0 992 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 STK38LQ9Y2H1 464 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 PCDHGB3Q9Y5G1 929 aa13.06□□□□□ -0.32
VTI1A-209ENST00000496445 MED12Q93074 2177 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 ANKHD1Q8IWZ3 2542 aaKnown RBP13.05□□□□□ -0.32
VTI1A-209ENST00000496445 C15orf38-AP3S2A0A0A6YYH1 394 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 ACOX3O15254 700 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 NME6O75414 186 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-209ENST00000496445 SNX4O95219 450 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 GABRA1P14867 456 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 PTPN6P29350 595 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 ZFP36L2P47974 494 aaKnown RBP13.05□□□□□ -0.32
VTI1A-209ENST00000496445 MASP1P48740 699 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 CDK9P50750 372 aaKnown RBP13.05□□□□□ -0.32
VTI1A-209ENST00000496445 PLCXD2Q0VAA5 305 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 CEBPEQ15744 281 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 DCST1Q5T197 706 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 TMEM81Q6P7N7 255 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 GALNT18Q6P9A2 607 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 SCIMPQ6UWF3 145 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 ZYG11AQ6WRX3 759 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 CCDC116Q8IYX3 515 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 OR9A2Q8NGT5 310 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 C16orf78Q8WTQ4 265 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 EXOSC8Q96B26 276 aaKnown RBP13.05□□□□□ -0.32
VTI1A-209ENST00000496445 HSPBAP1Q96EW2 488 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 OCEL1Q9H607 264 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 MCCC2Q9HCC0 563 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 GALNT9Q9HCQ5 603 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 TNFRSF12AQ9NP84 129 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 MID1IP1Q9NPA3 183 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 PSME2Q9UL46 239 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 ZNF780BQ9Y6R6 833 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 ZFHX3Q15911 3703 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 F8P00451 2351 aa13.05□□□□□ -0.32
VTI1A-209ENST00000496445 DOCK7Q96N67 2140 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 GNG14A0A1W2PPG7 69 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 SERTM1A2A2V5 107 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 FRG2CA6NGY1 282 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 GNB5O14775 395 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 UGT2B11O75310 529 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 GLRA3O75311 464 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 PROCP04070 461 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 HOXD4P09016 255 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-209ENST00000496445 MYL2P10916 166 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 DRD2P14416 443 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 NAGAP17050 411 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 KRT15P19012 456 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 WNT3P56703 355 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 RPP38P78345 283 aaKnown RBP13.04□□□□□ -0.32
VTI1A-209ENST00000496445 ACSM2AQ08AH3 577 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 ACSF3Q4G176 576 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-209ENST00000496445 EIPR1Q53HC9 387 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 NHSL2Q5HYW2 709 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 RIPPLY2Q5TAB7 128 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 ACSM2BQ68CK6 577 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 ANGPTL8Q6UXH0 198 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 FRMD7Q6ZUT3 714 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms