RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PLA2G12AQ9BZM1 189 aa12.71□□□□□ -0.38
GPC1-209ENST00000495100 GLIPR2Q9H4G4 154 aa12.71□□□□□ -0.38
GPC1-209ENST00000495100 NDOR1Q9UHB4 597 aa12.71□□□□□ -0.38
GPC1-209ENST00000495100 ZFR2Q9UPR6 939 aaKnown RBP12.71□□□□□ -0.38
GPC1-209ENST00000495100 TOXO94900 526 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 RPL4P36578 427 aaKnown RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 RORCP51449 518 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 MPP7Q5T2T1 576 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 SLC46A3Q7Z3Q1 461 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 RAB43Q86YS6 212 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 IZUMO1Q8IYV9 350 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 ALDH16A1Q8IZ83 802 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 ADGRF3Q8IZF5 1079 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 PIK3R3Q92569 461 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 TM4SF18Q96CE8 201 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 FYTTD1Q96QD9 318 aaKnown RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 MCHR1Q99705 422 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 IFT27Q9BW83 186 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 DPH1Q9BZG8 443 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 PLSCR3Q9NRY6 295 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 CFL2Q9Y281 166 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 J3QLW9 94 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 PIP5K1CO60331 668 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 ACADMP11310 421 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 ZNF19P17023 458 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 NAA10P41227 235 aaPredicted RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 PXNP49023 591 aaPredicted RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 RPS25P62851 125 aaKnown RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 FAM27D1Q5T7N8 215 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 GDPD3Q7L5L3 318 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 ZNF784Q8NCA9 323 aaPredicted RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 HMGB4Q8WW32 186 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 YIPF6Q96EC8 236 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 SLC38A2Q96QD8 506 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 TEFMQ96QE5 360 aaKnown RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 EPYCQ99645 322 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 ZNF559Q9BR84 538 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 GPR174Q9BXC1 333 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 TEX12Q9BXU0 123 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 AKIP1Q9NQ31 210 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 SLC35C2Q9NQQ7 365 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 PHPT1Q9NRX4 125 aaPredicted RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 TBCCD1Q9NVR7 557 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 ZNF222Q9UK12 451 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 PCDHGA2Q9Y5H1 932 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 A0A1B0GVT2 93 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 FFAR1O14842 300 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 PDE9AO76083 593 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 NFATC1O95644 943 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 IFNA16P05015 189 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 MMP11P24347 488 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 CDK3Q00526 305 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 EXOSC7Q15024 291 aaKnown RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 HNRNPA1L2Q32P51 320 aaKnown RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 NUP43Q8NFH3 380 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 BBS1Q8NFJ9 593 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 NELL2Q99435 816 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 SRMSQ9H3Y6 488 aa12.7□□□□□ -0.38
GPC1-209ENST00000495100 CRNNQ9UBG3 495 aaPredicted RBP12.7□□□□□ -0.38
GPC1-209ENST00000495100 ARHGEF17Q96PE2 2063 aaPredicted RBP12.69□□□□□ -0.38
GPC1-209ENST00000495100 HNRNPCL2B2RXH8 293 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 DSCR3O14972 297 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 OR10H2O60403 315 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 B4GALT2O60909 372 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 OR5F1O95221 314 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 PRG2P13727 222 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 BMP7P18075 431 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 DDCP20711 480 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 HOXD12P35452 270 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 EIF2DP41214 584 aaKnown RBP12.69□□□□□ -0.38
GPC1-209ENST00000495100 HCCSP53701 268 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 DPPA4Q7L190 304 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 NKAIN4Q8IVV8 208 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 ACOT4Q8N9L9 421 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 SLC16A11Q8NCK7 471 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 OR6K6Q8NGW6 343 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 OR8K3Q8NH51 312 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 SAMD8Q96LT4 415 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 FOXN4Q96NZ1 517 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 DOK1Q99704 481 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 MROQ9BYG7 248 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 KCMF1Q9P0J7 381 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 RPL36Q9Y3U8 105 aaKnown RBP12.69□□□□□ -0.38
GPC1-209ENST00000495100 A0A1W2PRG6 482 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 GRXCR2A6NFK2 248 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 AGAP14A8MT82 685 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 SLC30A4O14863 429 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 SLC16A5O15375 505 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 KCNK2O95069 426 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 NUDT14O95848 222 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 RPN2P04844 631 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 ALOX5P09917 674 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 LAMP2P13473 410 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 BAK1Q16611 211 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 FAM71E1Q6IPT2 247 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 CPOQ8IVL8 374 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 MFSD4AQ8N468 514 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 FBXL6Q8N531 539 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 GPR32P1Q8NGA4 272 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 C11orf24Q96F05 449 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms