RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 DVL1P1P54792 670 aaPredicted RBP12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 CDH15P55291 814 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 NRG3P56975 720 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 EEFSECP57772 596 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 IGLV3-21P80748 117 aaPredicted RBP12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 P2RY6Q15077 328 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 TCEAL1Q15170 157 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 MRNIPQ6NTE8 343 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 CASC4Q6P4E1 433 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 CCDC25Q86WR0 208 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 RBM18Q96H35 190 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 NODALQ96S42 347 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 TREX1Q9NSU2 369 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 MED16Q9Y2X0 877 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 FKBP7Q9Y680 259 aa12.89□□□□□ -0.35
CHMP2B-205ENST00000494980 LOC100653049A0A140TA62 436 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 LOC390937A0A1W2PQ73 354 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 KRT34O76011 436 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 KRT15P19012 456 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 CNTFP26441 200 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 ARNTP27540 789 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 ABCD3P28288 659 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 UBA52P62987 128 aaKnown RBP12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 HLA-DQA1Q5Y7H0 255 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 GALNT12Q8IXK2 581 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 ZDHHC22Q8N966 263 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 OR2L5Q8NG80 312 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 OR56A3Q8NH54 315 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 MAPKAP1Q9BPZ7 522 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 POTEKPQ9BYX7 375 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 STMN4Q9H169 189 aaPredicted RBP12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 C12orf49Q9H741 205 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 PELI2Q9HAT8 420 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 XPR1Q9UBH6 696 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 POU2F3Q9UKI9 436 aa12.88□□□□□ -0.35
CHMP2B-205ENST00000494980 WNK2Q9Y3S1 2297 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 PFDN6O15212 129 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 PJA2O43164 708 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 ZIC3O60481 467 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 SS18L1O75177 396 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 GCM2O75603 506 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 F7P08709 466 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 IL11P20809 199 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 NMBRP28336 390 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 SLC6A8P48029 635 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 FABP6P51161 128 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 GDF10P55107 478 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 CRADDP78560 199 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 DHX9Q08211 1270 aaKnown RBP12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 TMEM81Q6P7N7 255 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 B3GLCTQ6Y288 498 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 PLCZ1Q86YW0 608 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 CD200R1Q8TD46 325 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 GMPPAQ96IJ6 420 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 HDHD5Q9BXW7 423 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 REXO4Q9GZR2 422 aaKnown RBP12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 GOLPH3Q9H4A6 298 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 NHEJ1Q9H9Q4 299 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 PARVBQ9HBI1 364 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 LYRM4Q9HD34 91 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 ABHD10Q9NUJ1 306 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 KLHL42Q9P2K6 505 aa12.87□□□□□ -0.35
CHMP2B-205ENST00000494980 PCNX3Q9H6A9 2034 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 DYNC2H1Q8NCM8 4307 aaKnown RBP12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 PRAMEF25A6NGN4 478 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 EFCAB8A8MWE9 144 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 VAPBO95292 243 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 COL6A2P12110 1019 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 KCNC1P48547 511 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 CHN2P52757 468 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 CLDN20P56880 219 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 SPOCK1Q08629 439 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 SNTA1Q13424 505 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 PDAP1Q13442 181 aaKnown RBP12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 ZSWIM7Q19AV6 140 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 SPRED3Q2MJR0 410 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 NXPE4Q6UWF7 544 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 Q6ZPA2 131 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 GABRG1Q8N1C3 465 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 ZNF540Q8NDQ6 660 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 HPS1Q92902 700 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 HGDQ93099 445 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 SORCS2Q96PQ0 1159 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 SNX18Q96RF0 628 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 HBEGFQ99075 208 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 TCF12Q99081 682 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 GPR21Q99679 349 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 SUCNR1Q9BXA5 334 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 FBXO34Q9NWN3 711 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 NPAP1Q9NZP6 1156 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 IKZF3Q9UKT9 509 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 DYRK1BQ9Y463 629 aa12.86□□□□□ -0.35
CHMP2B-205ENST00000494980 ERI2A8K979 691 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 PPM1BO75688 479 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 ZNF189O75820 626 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms