RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 PORP16435 677 aaPredicted RBP9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 ELAVL4P26378 380 aaKnown RBP9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 SLC5A2P31639 672 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 CSNK1EP49674 416 aaKnown RBP9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 GFERP55789 205 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 CHRNEQ04844 493 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 PIGFQ07326 219 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 TOP3AQ13472 1001 aaPredicted RBP9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 RAB39AQ14964 217 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 NPTX1Q15818 432 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 DEFB133Q30KQ1 61 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 COLEC12Q5KU26 742 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 BROXQ5VW32 411 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 CDC73Q6P1J9 531 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 SPARTQ8N0X7 666 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 PARP8Q8N3A8 854 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 SLC16A11Q8NCK7 471 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 OR9A4Q8NGU2 314 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 VANGL1Q8TAA9 524 aaPredicted RBP9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 UBE2FQ969M7 185 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 ANKRD9Q96BM1 317 aaPredicted RBP9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 ZG16BQ96DA0 208 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 SPACA7Q96KW9 195 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 ALPK1Q96QP1 1244 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 CCDC3Q9BQI4 270 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 QRSL1Q9H0R6 528 aaKnown RBP9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 MAN2C1Q9NTJ4 1040 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 PTTG2Q9NZH5 202 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 PTGFRNQ9P2B2 879 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 C19orf53Q9UNZ5 99 aaPredicted RBP9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 LIPT1Q9Y234 373 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 POFUT2Q9Y2G5 429 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 FAM32AQ9Y421 112 aaKnown RBP9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 COMMD3-BMI1R4GMX3 469 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 PI4KAP42356 2102 aa9.95□□□□□ -0.82
PRPF4B-209ENST00000494674 CASC3O15234 703 aaKnown RBP9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 FOXS1O43638 330 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 CCNB2O95067 398 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 GPR75O95800 540 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 ANGPTL1O95841 491 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 DCNP07585 359 aaKnown RBP9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 IFI6P09912 130 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 FMO3P31513 532 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 GGT2P36268 569 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 RAB38P57729 211 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 NUP107P57740 925 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 CXCR4P61073 352 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 HNRNPKP61978 463 aaKnown RBP eCLIP9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 GNA13Q14344 377 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 FAM214AQ32MH5 1076 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 C14orf28Q4W4Y0 310 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 GPAT3Q53EU6 434 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 TRMT12Q53H54 448 aaKnown RBP9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 GTF2IRD2BQ6EKJ0 949 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 KLHL35Q6PF15 583 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 SLC36A4Q6YBV0 504 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 DEF8Q6ZN54 512 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 FRRS1Q6ZNA5 592 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 FAM92BQ6ZTR7 304 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 GPR141Q7Z602 305 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 GTF2IRD2Q86UP8 949 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 ENTHD1Q8IYW4 607 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 AQP11Q8NBQ7 271 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 OR6T1Q8NGN1 323 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 ZNF675Q8TD23 568 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 PHF10Q8WUB8 498 aaKnown RBP9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 CDS1Q92903 461 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 COL26A1Q96A83 441 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 APOL4Q9BPW4 351 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 PINK1Q9BXM7 581 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 DUSP15Q9H1R2 295 aaPredicted RBP9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 DUSP21Q9H596 190 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 MAT2BQ9NZL9 334 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 FTSJ1Q9UET6 329 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 VCANP13611 3396 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 RP1P56715 2156 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 FER1L5A0AVI2 2057 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 NUP210LQ5VU65 1888 aa9.94□□□□□ -0.82
PRPF4B-209ENST00000494674 A0A087WV62 115 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 TGFBR3LH3BV60 316 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 SYT5O00445 386 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 CHST10O43529 356 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 PLOD3O60568 738 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 FCMRO60667 390 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 SRPX2O60687 465 aaPredicted RBP9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 GASTP01350 101 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 H1F0P07305 194 aaKnown RBP9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 CT62P0C5K7 136 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 PCMT1P22061 227 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 EEF1B2P24534 225 aaKnown RBP9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 PCSK6P29122 969 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 KRT20P35900 424 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 MAP3K8P41279 467 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 CXCL12P48061 93 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 PDX1P52945 283 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 SLC35A2P78381 396 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 NEDD8Q15843 81 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 SMN1Q16637 294 aaKnown RBP9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 DUSP5Q16690 384 aa9.93□□□□□ -0.82
PRPF4B-209ENST00000494674 PRICKLE4Q2TBC4 344 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms