RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 MRPL1Q9BYD6 325 aaKnown RBP8.78□□□□□ -1
UBR4-216ENST00000494503 UBQLN3Q9H347 655 aa8.78□□□□□ -1
UBR4-216ENST00000494503 ELOVL6Q9H5J4 265 aa8.78□□□□□ -1
UBR4-216ENST00000494503 CALHM2Q9HA72 323 aa8.78□□□□□ -1
UBR4-216ENST00000494503 UBTD1Q9HAC8 227 aa8.78□□□□□ -1
UBR4-216ENST00000494503 DLL4Q9NR61 685 aa8.78□□□□□ -1
UBR4-216ENST00000494503 AHSPQ9NZD4 102 aa8.78□□□□□ -1
UBR4-216ENST00000494503 NDRG3Q9UGV2 375 aa8.78□□□□□ -1
UBR4-216ENST00000494503 SLC12A4Q9UP95 1085 aa8.78□□□□□ -1
UBR4-216ENST00000494503 CFL2Q9Y281 166 aa8.78□□□□□ -1
UBR4-216ENST00000494503 DTX4Q9Y2E6 619 aa8.78□□□□□ -1
UBR4-216ENST00000494503 RPH3AQ9Y2J0 694 aaPredicted RBP8.78□□□□□ -1
UBR4-216ENST00000494503 TNPO3Q9Y5L0 923 aaKnown RBP8.78□□□□□ -1
UBR4-216ENST00000494503 NSD1Q96L73 2696 aaPredicted RBP8.77□□□□□ -1.01
UBR4-216ENST00000494503 A0A096LPK6 155 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 FAM187AA6NFU0 413 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 PRAMEF25A6NGN4 478 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 SNPHO15079 494 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 ARHGEF9O43307 516 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 RAD51CO43502 376 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 UGDHO60701 494 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 SMPD2O60906 423 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 ICOSLGO75144 302 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 GUCY1B2O75343 617 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 C2P06681 752 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 ABCB1P08183 1280 aaPredicted RBP8.77□□□□□ -1.01
UBR4-216ENST00000494503 MTHFD2P13995 350 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 PCSK6P29122 969 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 TYK2P29597 1187 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 GALNSP34059 522 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 KRT20P35900 424 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 MAGEA4P43358 317 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 KCNJ5P48544 419 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 STARP49675 285 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 ARFIP1P53367 373 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 FUT7Q11130 342 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 E2F2Q14209 437 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 ACAP2Q15057 778 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 Q5PR19 223 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 FNDC7Q5VTL7 733 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 OR5M10Q6IEU7 315 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 SLC30A6Q6NXT4 461 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 POMZP3Q6PJE2 187 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 FAM111BQ6SJ93 734 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 TRIM42Q8IWZ5 723 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 UBQLNLQ8IYU4 475 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 CENPLQ8N0S6 344 aaPredicted RBP8.77□□□□□ -1.01
UBR4-216ENST00000494503 ZNF615Q8N8J6 731 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 PTGR2Q8N8N7 351 aaPredicted RBP8.77□□□□□ -1.01
UBR4-216ENST00000494503 OR7G1Q8NGA0 311 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 OR52B6Q8NGF0 335 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 OR52R1Q8NGF1 315 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 RHEBL1Q8TAI7 183 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 NUDT8Q8WV74 236 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 ADIPOR1Q96A54 375 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 ZC3HAV1LQ96H79 300 aaKnown RBP8.77□□□□□ -1.01
UBR4-216ENST00000494503 DACH2Q96NX9 599 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 NODALQ96S42 347 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 KCNF1Q9H3M0 494 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 ACBD3Q9H3P7 528 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 PLEKHF2Q9H8W4 249 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 RYDENQ9NUL5 291 aaKnown RBP8.77□□□□□ -1.01
UBR4-216ENST00000494503 BEX4Q9NWD9 120 aaPredicted RBP8.77□□□□□ -1.01
UBR4-216ENST00000494503 TAS2R10Q9NYW0 307 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 C6orf203Q9P0P8 240 aaPredicted RBP8.77□□□□□ -1.01
UBR4-216ENST00000494503 SENP1Q9P0U3 644 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 PLLPQ9Y342 182 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 ZNF780BQ9Y6R6 833 aa8.77□□□□□ -1.01
UBR4-216ENST00000494503 FOXE1O00358 373 aaPredicted RBP8.76□□□□□ -1.01
UBR4-216ENST00000494503 SMIM24O75264 130 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 REM1O75628 298 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 SEMA3DO95025 777 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 IL18BPO95998 194 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 HRGP04196 525 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 CD53P19397 219 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 CSNK2A2P19784 350 aaPredicted RBP8.76□□□□□ -1.01
UBR4-216ENST00000494503 IL12BP29460 328 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 SOX18P35713 384 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 SLCO1A2P46721 670 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 SERPINB8P50452 374 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 SIRPAP78324 504 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 MRPS35P82673 323 aaKnown RBP8.76□□□□□ -1.01
UBR4-216ENST00000494503 NAB1Q13506 487 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 LTB4RQ15722 352 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 NHSL2Q5HYW2 709 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 FRG2Q64ET8 278 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 AAGABQ6PD74 315 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 SCIMPQ6UWF3 145 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 NUP54Q7Z3B4 507 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 COMMD6Q7Z4G1 85 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 WDR20Q8TBZ3 569 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 FBXO25Q8TCJ0 367 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 ZPLD1Q8TCW7 415 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 ZNF592Q92610 1267 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 TMBIM1Q969X1 311 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 ISL2Q96A47 359 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 TMCO6Q96DC7 493 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 DTNBP1Q96EV8 351 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 PIK3IP1Q96FE7 263 aa8.76□□□□□ -1.01
UBR4-216ENST00000494503 PERPQ96FX8 193 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms