RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.76□□□□□ -0.69
UBA3-211ENST00000493957 HPF1Q9NWY4 346 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 TAS2R7Q9NYW3 318 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 PCNX1Q96RV3 2341 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 ZNF195O14628 629 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 KLF11O14901 512 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 SCAMP2O15127 329 aaKnown RBP10.75□□□□□ -0.69
UBA3-211ENST00000493957 PDPK1O15530 556 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 TBX19O60806 448 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 SNUPNO95149 360 aaKnown RBP10.75□□□□□ -0.69
UBA3-211ENST00000493957 RASAL1O95294 804 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 ALDOCP09972 364 aaKnown RBP10.75□□□□□ -0.69
UBA3-211ENST00000493957 CCL3P10147 92 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 LAMP1P11279 417 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 CD46P15529 392 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 GNLYP22749 145 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 MAPK1P28482 360 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 NTSP30990 170 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 CDK9P50750 372 aaKnown RBP10.75□□□□□ -0.69
UBA3-211ENST00000493957 EMX2Q04743 252 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 HSPB3Q12988 150 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 ZNF791Q3KP31 576 aaPredicted RBP10.75□□□□□ -0.69
UBA3-211ENST00000493957 SLC9B1Q4ZJI4 515 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 ZNF324BQ6AW86 544 aaPredicted RBP10.75□□□□□ -0.69
UBA3-211ENST00000493957 WDR53Q7Z5U6 358 aaPredicted RBP10.75□□□□□ -0.69
UBA3-211ENST00000493957 TRIM42Q8IWZ5 723 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 CPSF7Q8N684 471 aaKnown RBP10.75□□□□□ -0.69
UBA3-211ENST00000493957 OR5M3Q8NGP4 307 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 MAGED4Q96JG8 741 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 FRMD6Q96NE9 622 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 TSPAN10Q9H1Z9 355 aaPredicted RBP10.75□□□□□ -0.69
UBA3-211ENST00000493957 SH3BP4Q9P0V3 963 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 ATP6V1HQ9UI12 483 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 ERVK-11Q9UQG0 969 aa10.75□□□□□ -0.69
UBA3-211ENST00000493957 WBP11Q9Y2W2 641 aaKnown RBP10.75□□□□□ -0.69
UBA3-211ENST00000493957 USP9XQ93008 2570 aaPredicted RBP10.74□□□□□ -0.69
UBA3-211ENST00000493957 HDAC3O15379 428 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 ZNHIT1O43257 154 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 FBXO45P0C2W1 286 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 PRPS2P11908 318 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 EPHA3P29320 983 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 MPIP34949 423 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 HPCAL1P37235 193 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 FRKP42685 505 aaPredicted RBP10.74□□□□□ -0.69
UBA3-211ENST00000493957 ASMTP46597 345 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 MEOX1P50221 254 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 TDGF1P3P51864 188 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 CORO7P57737 925 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 INAQ16352 499 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 HLA-DQA1Q5Y7H0 255 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 FAM180AQ6UWF9 173 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 NPSR1Q6W5P4 371 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 LARP4Q71RC2 724 aaKnown RBP eCLIP10.74□□□□□ -0.69
UBA3-211ENST00000493957 SULF2Q8IWU5 870 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 RIMKLAQ8IXN7 391 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 SAMD14Q8IZD0 417 aaPredicted RBP10.74□□□□□ -0.69
UBA3-211ENST00000493957 TMEM178AQ8NBL3 297 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 PSD4Q8NDX1 1056 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 OR10G3Q8NGC4 313 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 SLC22A8Q8TCC7 542 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 FAR1Q8WVX9 515 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 TMEM125Q96AQ2 219 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 SPACA9Q96E40 222 aaPredicted RBP10.74□□□□□ -0.69
UBA3-211ENST00000493957 ZNF764Q96H86 408 aaPredicted RBP10.74□□□□□ -0.69
UBA3-211ENST00000493957 MARK4Q96L34 752 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 SLX1AQ9BQ83 275 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 FOLH1BQ9HBA9 442 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 SH2D2AQ9NP31 389 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 INTS9Q9NV88 658 aaKnown RBP10.74□□□□□ -0.69
UBA3-211ENST00000493957 ASIC5Q9NY37 505 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 NOP53Q9NZM5 478 aaKnown RBP10.74□□□□□ -0.69
UBA3-211ENST00000493957 EIF3LQ9Y262 564 aaKnown RBP10.74□□□□□ -0.69
UBA3-211ENST00000493957 PCDHGB6Q9Y5F9 930 aa10.74□□□□□ -0.69
UBA3-211ENST00000493957 ASPDHA6ND91 283 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 C9JVG2 144 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 UPK1AO00322 258 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 ANKRD28O15084 1053 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 PEX1O43933 1283 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 PLOD3O60568 738 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 WISP1O95388 367 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 ZIC2O95409 532 aaPredicted RBP10.73□□□□□ -0.69
UBA3-211ENST00000493957 PSMG1O95456 288 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 CBX6O95503 412 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 LBPP18428 481 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 ABCD3P28288 659 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 PIGAP37287 484 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 DNASE1L1P49184 302 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 NME5P56597 212 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 FBXW4P57775 412 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 ZNF155Q12901 538 aaPredicted RBP10.73□□□□□ -0.69
UBA3-211ENST00000493957 PRAMEF20Q5VT98 475 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 TMEM198Q66K66 360 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 BICRALQ6AI39 1079 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 OPN5Q6U736 354 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 RTL4Q6ZR62 310 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 FAM47EQ6ZV65 393 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 HOMEZQ8IX15 550 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 GPALPP1Q8IXQ4 340 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 OR2L13Q8N349 312 aa10.73□□□□□ -0.69
UBA3-211ENST00000493957 HORMAD2Q8N7B1 307 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms