RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 NSG1A0A0A6YYJ2 146 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 CDC14CA4D256 554 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 ANKRD65E5RJM6 399 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 KLK10O43240 276 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 PRKAR1AP10644 381 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 WT1P19544 449 aaPredicted RBP18.02■□□□□ 0.47
USP39-218ENST00000493829 MVDP53602 400 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 SLC26A5P58743 744 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 BTBD16Q32M84 506 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 MFSD12Q6NUT3 480 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 HORMAD2Q8N7B1 307 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 ZNF615Q8N8J6 731 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 FAM156AQ8NDB6 213 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 MORN4Q8NDC4 146 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 NFAM1Q8NET5 270 aaPredicted RBP18.02■□□□□ 0.47
USP39-218ENST00000493829 OR10A6Q8NH74 314 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 C16orf52Q8NHV5 167 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 SLC9A6Q92581 669 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 RAB8BQ92930 207 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 ART5Q96L15 291 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 OR51I1Q9H343 314 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 P4HTMQ9NXG6 502 aa18.02■□□□□ 0.47
USP39-218ENST00000493829 FAF1Q9UNN5 650 aaPredicted RBP18.02■□□□□ 0.47
USP39-218ENST00000493829 TRBV11-1A0A0K0K1C0 115 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 PSMG1O95456 288 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 IGKV3-11P04433 115 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 NUDT7P0C024 238 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 TCN1P20061 433 aaPredicted RBP18.01■□□□□ 0.47
USP39-218ENST00000493829 MATN1P21941 496 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 PPIBP23284 216 aaKnown RBP18.01■□□□□ 0.47
USP39-218ENST00000493829 SLC37A1P57057 533 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 RGNQ15493 299 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 CYP51A1Q16850 503 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 OR52N2Q8NGI0 321 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 OR1N1Q8NGS0 311 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 MCUR1Q96AQ8 359 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 ECSITQ9BQ95 431 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 ITPAQ9BY32 194 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 CADM1Q9BY67 442 aaKnown RBP18.01■□□□□ 0.47
USP39-218ENST00000493829 FOLH1BQ9HBA9 442 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 NTMQ9P121 344 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 ZNF223Q9UK11 482 aaPredicted RBP18.01■□□□□ 0.47
USP39-218ENST00000493829 ANGPTL2Q9UKU9 493 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 HEMK1Q9Y5R4 338 aaPredicted RBP18.01■□□□□ 0.47
USP39-218ENST00000493829 CEP295Q9C0D2 2601 aa18.01■□□□□ 0.47
USP39-218ENST00000493829 DNAJC8O75937 253 aaPredicted RBP18■□□□□ 0.47
USP39-218ENST00000493829 SORBS2O94875 1100 aaKnown RBP18■□□□□ 0.47
USP39-218ENST00000493829 ACP2P11117 423 aa18■□□□□ 0.47
USP39-218ENST00000493829 KHKP50053 298 aa18■□□□□ 0.47
USP39-218ENST00000493829 EMDP50402 254 aa18■□□□□ 0.47
USP39-218ENST00000493829 CORO7P57737 925 aa18■□□□□ 0.47
USP39-218ENST00000493829 LIPEQ05469 1076 aa18■□□□□ 0.47
USP39-218ENST00000493829 ASRGL1Q7L266 308 aa18■□□□□ 0.47
USP39-218ENST00000493829 NDUFAF7Q7L592 441 aa18■□□□□ 0.47
USP39-218ENST00000493829 GPR155Q7Z3F1 870 aa18■□□□□ 0.47
USP39-218ENST00000493829 C9orf40Q8IXQ3 194 aa18■□□□□ 0.47
USP39-218ENST00000493829 APCDD1LQ8NCL9 501 aa18■□□□□ 0.47
USP39-218ENST00000493829 ZNF248Q8NDW4 579 aa18■□□□□ 0.47
USP39-218ENST00000493829 OR7G1Q8NGA0 311 aa18■□□□□ 0.47
USP39-218ENST00000493829 THAP3Q8WTV1 239 aaPredicted RBP18■□□□□ 0.47
USP39-218ENST00000493829 SH3GL1Q99961 368 aa18■□□□□ 0.47
USP39-218ENST00000493829 CCDC86Q9H6F5 360 aaKnown RBP18■□□□□ 0.47
USP39-218ENST00000493829 KAT8Q9H7Z6 458 aaKnown RBP18■□□□□ 0.47
USP39-218ENST00000493829 TMEM181Q9P2C4 612 aa18■□□□□ 0.47
USP39-218ENST00000493829 ABCD2Q9UBJ2 740 aa18■□□□□ 0.47
USP39-218ENST00000493829 PEX12O00623 359 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 PCDH17O14917 1159 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 OR12D1P0DN82 309 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 MSX2P35548 267 aaPredicted RBP17.99■□□□□ 0.47
USP39-218ENST00000493829 PGM1P36871 562 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 PRIM2P49643 509 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 VAC14Q08AM6 782 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 SLC16A11Q8NCK7 471 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 ADAMTS17Q8TE56 1095 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 MAL2Q969L2 176 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 CCDC124Q96CT7 223 aaKnown RBP17.99■□□□□ 0.47
USP39-218ENST00000493829 VMP1Q96GC9 406 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 OR7D2Q96RA2 312 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 EFHD1Q9BUP0 239 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 ACTRT3Q9BYD9 372 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 FAM117AQ9C073 453 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 LIN28AQ9H9Z2 209 aaKnown RBP17.99■□□□□ 0.47
USP39-218ENST00000493829 CORO2BQ9UQ03 480 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 MED19A0JLT2 244 aaPredicted RBP17.99■□□□□ 0.47
USP39-218ENST00000493829 PRORSD1PA6NEY8 169 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 GSC2O15499 205 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 NKX2-8O15522 239 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 BCAS2O75934 225 aaPredicted RBP17.99■□□□□ 0.47
USP39-218ENST00000493829 GSK3BP49841 420 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 GPR143P51810 404 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 CEACAM7Q14002 265 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 DUSP5Q16690 384 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 SLC44A2Q8IWA5 706 aaPredicted RBP17.99■□□□□ 0.47
USP39-218ENST00000493829 CDS1Q92903 461 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 DCBLD2Q96PD2 775 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 RAD21L1Q9H4I0 556 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 ALG2Q9H553 416 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 KCNE3Q9Y6H6 103 aa17.99■□□□□ 0.47
USP39-218ENST00000493829 FRYQ5TBA9 3013 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 HPP00738 406 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms