RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SLC13A2Q13183 592 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 IL18R1Q13478 541 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 EXOC3L2Q2M3D2 409 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 PRICKLE4Q2TBC4 344 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 PEAR1Q5VY43 1037 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 HEPHL1Q6MZM0 1159 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 ZCCHC12Q6PEW1 402 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 OLIG3Q7RTU3 272 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 THAP5Q7Z6K1 395 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 GALNT5Q7Z7M9 940 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 KMT5CQ86Y97 462 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 GATAD2AQ86YP4 633 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 C1orf210Q8IVY1 113 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 ZNF595Q8IYB9 648 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 MAML2Q8IZL2 1156 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 TAGAPQ8N103 731 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 PIK3C3Q8NEB9 887 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 VANGL1Q8TAA9 524 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 SLC9A6Q92581 669 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 CDS1Q92903 461 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 ANKRD9Q96BM1 317 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 MMABQ96EY8 250 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 PEX11GQ96HA9 241 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 NECAB3Q96P71 396 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 TRNT1Q96Q11 434 aaKnown RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 PINK1Q9BXM7 581 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 ING2Q9H160 280 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 SLC38A1Q9H2H9 487 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 ADAP2Q9NPF8 381 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 PRTFDC1Q9NRG1 225 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 SEMA5BQ9P283 1151 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 KCND3Q9UK17 655 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 SLC13A4Q9UKG4 626 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 SLC9A8Q9Y2E8 581 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 KCNE3Q9Y6H6 103 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 CABIN1Q9Y6J0 2220 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 DSPPQ9NZW4 1301 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 LOC100130705A0A1B0GUX0 176 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 ARRDC5A6NEK1 342 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 TMEM221A6NGB7 291 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 A8MVJ9 347 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 TMEM150CB9EJG8 249 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 M0R296 226 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 SYT5O00445 386 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 CLDN4O14493 209 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 SLC16A6O15403 523 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 HRO43593 1189 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 PCDHGA12O60330 932 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 CTNSO60931 367 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 UGT2B11O75310 529 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 OR2B3O76000 313 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 CCNB2O95067 398 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 AK1P00568 194 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 CFIP05156 583 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 PABPC4LP0CB38 370 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 MYF5P13349 255 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 ANXA8P13928 327 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 ATP6V1B1P15313 513 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 PNLIPP16233 465 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 CD1CP29017 333 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 HOXD12P35452 270 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 SEPHS1P49903 392 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 PDX1P52945 283 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 IGLV3-21P80748 117 aaPredicted RBP8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 MAT1AQ00266 395 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 CFHR1Q03591 330 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 STX4Q12846 297 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 ZNF155Q12901 538 aaPredicted RBP8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 KEAP1Q14145 624 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 PUM1Q14671 1186 aaKnown RBP eCLIP8.55□□□□□ -1.045e-10■□□□□ 10
SMARCC1-208ENST00000492896 KCNAB1Q14722 419 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 DUSP5Q16690 384 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 MICAQ29983 383 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 ARHGAP11BQ3KRB8 267 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 TRMT12Q53H54 448 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 COLEC12Q5KU26 742 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 EXOSC6Q5RKV6 272 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 SNAP47Q5SQN1 464 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 ZNF691Q5VV52 312 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 WDR74Q6RFH5 385 aaPredicted RBP8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 DEF8Q6ZN54 512 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 WDR53Q7Z5U6 358 aaPredicted RBP8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 RABEPKQ7Z6M1 372 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 SHISA5Q8N114 240 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 VWA5B2Q8N398 1253 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 D2HGDHQ8N465 521 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 METTL27Q8N6F8 245 aaPredicted RBP8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 CDRT4Q8N9R6 151 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 SETD9Q8NE22 299 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 TSPAN14Q8NG11 270 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 OR4C6Q8NH72 309 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 SAP25Q8TEE9 199 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 PHF10Q8WUB8 498 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 MVB12AQ96EY5 273 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 SLC35A4Q96G79 324 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 SLC41A2Q96JW4 573 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 DHRS1Q96LJ7 313 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 MUS81Q96NY9 551 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 DGAT2Q96PD7 388 aa8.55□□□□□ -1.04
SMARCC1-208ENST00000492896 STACQ99469 402 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms