RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 RANGRFQ9HD47 186 aaPredicted RBP3.96□□□□□ -1.78
BRCA1-220ENST00000492859 HRASLSQ9HDD0 168 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 FZD3Q9NPG1 666 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 SDHAF2Q9NX18 166 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 SMPD4Q9NXE4 827 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 PLK2Q9NYY3 685 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 LRWD1Q9UFC0 647 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 MLXQ9UH92 298 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 SLC23A1Q9UHI7 598 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 SERTAD3Q9UJW9 196 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 GUCA1BQ9UMX6 200 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 FOXJ3Q9UPW0 622 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 SLC27A6Q9Y2P4 619 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 OR10H1Q9Y4A9 318 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 ALG6Q9Y672 507 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 DUSP10Q9Y6W6 482 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 KIF15Q9NS87 1388 aa3.96□□□□□ -1.78
BRCA1-220ENST00000492859 RB1CC1Q8TDY2 1594 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 A0A087X1B8 175 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 LOC105369274A0A096LPK9 316 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 LOC102723532A0A0G2JNH3 316 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 A0A1B0GVL5 298 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SH3PXD2BA1X283 911 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ANKRD65E5RJM6 399 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 PPIAL4DF5H284 164 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 TMX2-CTNND1H3BSU7 103 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 M0QZ92 97 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SLC28A1O00337 649 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CYB561D2O14569 222 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 RFXANKO14593 260 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 RAB29O14966 203 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 LRP3O75074 770 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SRP72O76094 671 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 TJP3O95049 919 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 WNT11O96014 354 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 GSRP00390 522 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 C8AP07357 584 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ANKRD34CP0C6C1 535 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SMIM6P0DI80 62 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SLC2A4P14672 509 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CD1EP15812 388 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ST6GAL1P15907 406 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ACADSP16219 412 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 AMD1P17707 334 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 NPR2P20594 1047 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CD72P21854 359 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 APEX1P27695 318 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 DCKP27707 260 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SSTR2P30874 369 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 PRDX2P32119 198 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 KDELR2P33947 212 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 NTF4P34130 210 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 BMP8BP34820 402 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 RCVRNP35243 200 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ACVR1BP36896 505 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 BCL6P41182 706 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 MAGEA3P43357 314 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 PLA2G16P53816 162 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 UCNP55089 124 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 EEFSECP57772 596 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ZP1P60852 638 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 HERVK_113P63132 956 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 KCNJ2P63252 427 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 HSD11B2P80365 405 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 DEFA6Q01524 100 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 BST2Q10589 180 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 PDIA2Q13087 525 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 DPYSL3Q14195 570 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 MESDQ14696 234 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 POU6F1Q14863 301 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 P2RY14Q15391 338 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 TAF13Q15543 124 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 TRIP10Q15642 601 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 KCNJ8Q15842 424 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 MRPL23Q16540 153 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF568Q3ZCX4 644 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CXorf66Q5JRM2 361 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF569Q5MCW4 686 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 OR52W1Q6IF63 320 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 H3F3CQ6NXT2 135 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 FAM199XQ6PEV8 388 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 FAM198BQ6UWH4 519 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 GLB1LQ6UWU2 654 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CYHR1Q6ZMK1 362 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SLCO4C1Q6ZQN7 724 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 C17orf107Q6ZR85 190 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 ASB18Q6ZVZ8 466 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 OTOP2Q7RTS6 562 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SLC16A9Q7RTY1 509 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 TIPARPQ7Z3E1 657 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 YTHDF3Q7Z739 585 aaKnown RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 RNF130Q86XS8 419 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CACUL1Q86Y37 369 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CILP2Q8IUL8 1156 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM126BQ8IUX1 230 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 CROCCP3Q8IVE0 287 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 NAXDQ8IW45 347 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 OR4N4Q8N0Y3 316 aa3.95□□□□□ -1.78
BRCA1-220ENST00000492859 RIBC1Q8N443 379 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-220ENST00000492859 SLC44A3Q8N4M1 653 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms