RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 TSPAN8P19075 237 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 RFC2P35250 354 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 SLC6A8P48029 635 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 RPL34P49207 117 aaKnown RBP3.14□□□□□ -1.91
CLK1-213ENST00000492793 SGSHP51688 502 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 IST1P53990 364 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 HMGCS2P54868 508 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 GABPB1Q06547 395 aaPredicted RBP3.14□□□□□ -1.91
CLK1-213ENST00000492793 SNX1Q13596 522 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 SLC10A1Q14973 349 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 PKN2Q16513 984 aaKnown RBP3.14□□□□□ -1.91
CLK1-213ENST00000492793 CCL14Q16627 93 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 PARP6Q2NL67 630 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 EIPR1Q53HC9 387 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 TCTEX1D4Q5JR98 221 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 TAF3Q5VWG9 929 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 FAM159AQ6UWV7 190 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 OLFM4Q6UX06 510 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 GOLGA7Q7Z5G4 137 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 RANBP3LQ86VV4 465 aaPredicted RBP3.14□□□□□ -1.91
CLK1-213ENST00000492793 P2RY8Q86VZ1 359 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 AMZ2Q86W34 360 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 ZNF491Q8N8L2 437 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 MRPL43Q8N983 215 aaKnown RBP3.14□□□□□ -1.91
CLK1-213ENST00000492793 OR6T1Q8NGN1 323 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 WDR36Q8NI36 951 aaKnown RBP3.14□□□□□ -1.91
CLK1-213ENST00000492793 TADA1Q96BN2 335 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 SAMD8Q96LT4 415 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 MCCC1Q96RQ3 725 aaPredicted RBP3.14□□□□□ -1.91
CLK1-213ENST00000492793 C19orf43Q9BQ61 176 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 NDUFAF3Q9BU61 184 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 RWDD1Q9H446 243 aaPredicted RBP3.14□□□□□ -1.91
CLK1-213ENST00000492793 ALG9Q9H6U8 611 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 NGBQ9NPG2 151 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 TIGARQ9NQ88 270 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 SOHLH2Q9NX45 425 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 FZR1Q9UM11 496 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 RNF24Q9Y225 148 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.14□□□□□ -1.91
CLK1-213ENST00000492793 SYNJ2O15056 1496 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 TRAV9-2A0A087WT02 112 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 NPIPA5A0A0B4J1W7 369 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 MFSD2BA6NFX1 497 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 CCT8L1PA6NM43 557 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 NPIPA5E9PKD4 350 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 C11orf98E9PRG8 122 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 BUB1O43683 1085 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 RHBDL1O75783 438 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 MELTFP08582 738 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 FAM200BP0CF97 657 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 GP9P14770 177 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 IL10P22301 178 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 GATA2P23769 480 aaPredicted RBP3.13□□□□□ -1.91
CLK1-213ENST00000492793 RPA1P27694 616 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 CHRNA3P32297 505 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ELK3P41970 407 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ASMTP46597 345 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 CAMLGP49069 296 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 TAF6P49848 677 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 VCPP55072 806 aaKnown RBP3.13□□□□□ -1.91
CLK1-213ENST00000492793 MTTPP55157 894 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 HERVK_113P63132 956 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ERVK-8P63133 956 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 EIF2B1Q14232 305 aaKnown RBP3.13□□□□□ -1.91
CLK1-213ENST00000492793 CEBPEQ15744 281 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ZNF528Q3MIS6 628 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 SEL1L2Q5TEA6 688 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ADAMTSL5Q6ZMM2 481 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 PRSS48Q7RTY5 328 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 CEACAM19Q7Z692 300 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ZSCAN30Q86W11 494 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ZNF397Q8NF99 534 aaPredicted RBP3.13□□□□□ -1.91
CLK1-213ENST00000492793 OR56B1Q8NGI3 324 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 RFESDQ8TAC1 157 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ZBED6CLQ96FA7 236 aaPredicted RBP3.13□□□□□ -1.91
CLK1-213ENST00000492793 FAM173AQ9BQD7 235 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ST6GALNAC5Q9BVH7 336 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ERVK-6Q9BXR3 956 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 TSPY26PQ9H489 355 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ROPN1Q9HAT0 212 aaPredicted RBP3.13□□□□□ -1.91
CLK1-213ENST00000492793 RPS10P5Q9NQ39 176 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 YAE1D1Q9NRH1 226 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 CENPMQ9NSP4 180 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 DHRS4-AS1Q9P1J3 65 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 PRODH2Q9UF12 536 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 ZNF490Q9ULM2 529 aaPredicted RBP3.13□□□□□ -1.91
CLK1-213ENST00000492793 KLF2Q9Y5W3 355 aaPredicted RBP3.13□□□□□ -1.91
CLK1-213ENST00000492793 CLCA3PQ9Y6N3 262 aa3.13□□□□□ -1.91
CLK1-213ENST00000492793 PTPRUQ92729 1446 aa3.12□□□□□ -1.91
CLK1-213ENST00000492793 LRIT2A6NDA9 550 aa3.12□□□□□ -1.91
CLK1-213ENST00000492793 GPRIN2O60269 458 aa3.12□□□□□ -1.91
CLK1-213ENST00000492793 SDC3O75056 442 aa3.12□□□□□ -1.91
CLK1-213ENST00000492793 STK17BO94768 372 aa3.12□□□□□ -1.91
CLK1-213ENST00000492793 VENTXO95231 258 aa3.12□□□□□ -1.91
CLK1-213ENST00000492793 PTBP3O95758 552 aaKnown RBP3.12□□□□□ -1.91
CLK1-213ENST00000492793 IGSF6O95976 241 aa3.12□□□□□ -1.91
CLK1-213ENST00000492793 PIGRP01833 764 aa3.12□□□□□ -1.91
CLK1-213ENST00000492793 SNRPCP09234 159 aaKnown RBP3.12□□□□□ -1.91
CLK1-213ENST00000492793 GSTT2P0CG29 244 aa3.12□□□□□ -1.91
CLK1-213ENST00000492793 GSTT2BP0CG30 244 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms