RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 HEPACAM2A8MVW5 462 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 NPIPB8E9PQR5 432 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 GCM2O75603 506 aaPredicted RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 OSMP13725 252 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 XCR1P46094 333 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 MMP15P51511 669 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 NUBP1P53384 320 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 ACSM1Q08AH1 577 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 HTR4Q13639 388 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 CDNFQ49AH0 187 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 GREB1Q4ZG55 1949 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 ARSIQ5FYB1 569 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 PRAMEF13Q5VWM6 474 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 HBMQ6B0K9 141 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 UNC5DQ6UXZ4 953 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 ANKRD46Q86W74 232 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 RGL4Q8IZJ4 473 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 SPAG16Q8N0X2 631 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 SLC43A2Q8N370 569 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 TOMM5Q8N4H5 51 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 FAM26EQ8N5C1 309 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 OR4L1Q8NH43 312 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 FAM167AQ96KS9 214 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 IL4I1Q96RQ9 567 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 KIAA1671Q9BY89 1806 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 PIGMQ9H3S5 423 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 MTG2Q9H4K7 406 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 RASL12Q9NYN1 266 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 TREM2Q9NZC2 230 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 METTL1Q9UBP6 276 aaKnown RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 ACSL6Q9UKU0 697 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 CORO2BQ9UQ03 480 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 PLEKHM1Q9Y4G2 1056 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 UTRNP46939 3433 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 MAGEB17A8MXT2 336 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 NEDD8-MDP1E9PL57 170 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 SIGLEC5O15389 551 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 STX11O75558 287 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 CDC123O75794 336 aaPredicted RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 NCR1O76036 304 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 ADAP00813 363 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 KLK3P07288 261 aaPredicted RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 MMP2P08253 660 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 RNF224P0DH78 156 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 FPR3P25089 353 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 TRHRP34981 398 aaPredicted RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 SRP9P49458 86 aaKnown RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 RAB5BP61020 215 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 WDR5P61964 334 aaKnown RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 SNRPEP62304 92 aaKnown RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 SIGLEC14Q08ET2 396 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 HABP2Q14520 560 aaPredicted RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 OR2B11Q5JQS5 317 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 SIRPB2Q5JXA9 342 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 TMEM88Q6PEY1 159 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 HFE2Q6ZVN8 426 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 SIAH3Q8IW03 269 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 AQP11Q8NBQ7 271 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 FAM98AQ8NCA5 519 aaKnown RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 BEST4Q8NFU0 473 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 NEIL3Q8TAT5 605 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 PHOSPHO1Q8TCT1 267 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 RXFP4Q8TDU9 374 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 GTPBP3Q969Y2 492 aaKnown RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 C12orf66Q96MD2 445 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 GPR21Q99679 349 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 EGLN1Q9GZT9 426 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 TDRD3Q9H7E2 651 aaKnown RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 IPPKQ9H8X2 491 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 TCF7L1Q9HCS4 588 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 PRMT8Q9NR22 394 aaPredicted RBP9.18□□□□□ -0.94
VPS8-225ENST00000492449 ASB6Q9NWX5 421 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 SNX10Q9Y5X0 201 aa9.18□□□□□ -0.94
VPS8-225ENST00000492449 DISC1C4P0D8 188 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 FPGTO14772 594 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 PPEF2O14830 753 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 GPR37O15354 613 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 FGF10O15520 208 aaPredicted RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 PRKRAO75569 313 aaKnown RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 PAK4O96013 591 aaPredicted RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 GASTP01350 101 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 C1QCP02747 245 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 HLA-DPB1P04440 258 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 ATXN1LP0C7T5 689 aaKnown RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 ZDHHC11BP0C7U3 371 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 MUC1P15941 1255 aaPredicted RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 MTNR1BP49286 362 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 XKP51811 444 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 SPCS3P61009 180 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 HMGCS1Q01581 520 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 DEF8Q6ZN54 512 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 Q6ZTK2 550 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 OR52J3Q8NH60 311 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 SPPL2AQ8TCT8 520 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 C2CD4CQ8TF44 421 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 SLC39A7Q92504 469 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 VOPP1Q96AW1 172 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 TSNAXQ99598 290 aaKnown RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 DPH2Q9BQC3 489 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms