RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SOX18P35713 384 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 DSG2Q14126 1118 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 PRSS53Q2L4Q9 553 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 KLHL12Q53G59 568 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 ASB18Q6ZVZ8 466 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 UBE2Q1Q7Z7E8 422 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 NEIL3Q8TAT5 605 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 PDXPQ96GD0 296 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 RNF32Q9H0A6 362 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF334Q9HCZ1 680 aaPredicted RBP18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 MRPS18AQ9NVS2 196 aaKnown RBP18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 SLCO1C1Q9NYB5 712 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 EXTL2Q9UBQ6 330 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 UNC80Q8N2C7 3258 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 C7orf66A4D0T2 115 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 SOCS5O75159 536 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 NME6O75414 186 aaPredicted RBP18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 DHFRP00374 187 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 ANXA3P12429 323 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 LAG3P18627 525 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 ELK1P19419 428 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 GIPRP48546 466 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 SNTA1Q13424 505 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 FGFBP1Q14512 234 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 SUZ12Q15022 739 aaKnown RBP18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 GRK1Q15835 563 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 CLLU1Q5K131 121 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 GPALPP1Q8IXQ4 340 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 ADGRF3Q8IZF5 1079 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 ARIH2OSQ8N7S6 290 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 LHFPL5Q8TAF8 219 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 PCNPQ8WW12 178 aaKnown RBP18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 OTULINQ96BN8 352 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 FUZQ9BT04 418 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 TMED9Q9BVK6 235 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 DPCDQ9BVM2 203 aaPredicted RBP18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 GHITMQ9H3K2 345 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 MVB12BQ9H7P6 319 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 PTTG3PQ9NZH4 202 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 A8MUA0 341 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 LANCL1O43813 399 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 LILRB3O75022 631 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 URODP06132 367 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 LIMS3P0CW19 117 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 LIMS4P0CW20 117 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 ATP1B2P14415 290 aaPredicted RBP18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 CFL1P23528 166 aaKnown RBP18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 RPS26P62854 115 aaKnown RBP18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 EFNB1P98172 346 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 EXOSC2Q13868 293 aaKnown RBP18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 RAB33AQ14088 237 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 PLEKHM3Q6ZWE6 761 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 WFDC5Q8TCV5 224 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 SLC38A5Q8WUX1 472 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 SCMH1Q96GD3 660 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 TBC1D17Q9HA65 648 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 STOX2Q9P2F5 926 aaPredicted RBP18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 FAM8A1Q9UBU6 413 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 EXOSC1Q9Y3B2 195 aaKnown RBP18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 SZT2Q5T011 3432 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 IRGMA1A4Y4 181 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 PRRG1O14668 218 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 LALBAP00709 142 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 OR12D1P0DN82 309 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 DDCP20711 480 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 CLCNKAP51800 687 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 RPA4Q13156 261 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 GALEQ14376 348 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 FAM122CQ6P4D5 195 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 BRAT1Q6PJG6 821 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 SHFQ7M4L6 423 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 C16orf62Q7Z3J2 963 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 DNAJB7Q7Z6W7 309 aaPredicted RBP18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 DCAF4L2Q8NA75 395 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 OR4D11Q8NGI4 311 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 C16orf78Q8WTQ4 265 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 ALG14Q96F25 216 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 ABCG5Q9H222 651 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 UCKL1Q9NWZ5 548 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 CLCA2Q9UQC9 943 aa18.26■□□□□ 0.51
SNAPC3-206ENST00000490969 TRAV6A0A075B6T7 132 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 SAP18O00422 153 aaKnown RBP18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 PRODHO43272 600 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 MTX2O75431 263 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 IFNA7P01567 189 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 RPL3P39023 403 aaKnown RBP18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 NNMTP40261 264 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 ETV3P41162 512 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 TAS2R50P59544 299 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 RASGRP3Q8IV61 690 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 LYSMD1Q96S90 227 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 WFDC6Q9BQY6 131 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 CUEDC1Q9NWM3 386 aaPredicted RBP18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 FBXW2Q9UKT8 454 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 PRRC2BQ5JSZ5 2229 aaKnown RBP18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 GABRPO00591 440 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 PTSQ03393 145 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 INSL4Q14641 139 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 CCSMST1Q4G0I0 132 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 FAM71E1Q6IPT2 247 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms