RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PRKYO43930 277 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 PRAF2O60831 178 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 LILRB5O75023 590 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 NIPSNAP2O75323 286 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 PRKRAO75569 313 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SC5DO75845 299 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 PAK4O96013 591 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SERPINA3P01011 423 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 TFP02787 698 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 RB1P06400 928 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 EPHX1P07099 455 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 GIPP09681 153 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SLURP2P0DP57 97 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ARAFP10398 606 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 LCP1P13796 627 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 DRD2P14416 443 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ERCC2P18074 760 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 LAP3P28838 519 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 PRDX3P30048 256 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ADRA1AP35348 466 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 AVPR1BP47901 424 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 RPL34P49207 117 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SELENOPP49908 381 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 XKP51811 444 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 STARD6P59095 220 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ZP1P60852 638 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 IL10RBQ08334 325 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 PPIGQ13427 754 aaKnown RBP eCLIP4.51□□□□□ -1.694e-6■■□□□ 13.5
SNRNP40-206ENST00000489853 MADCAM1Q13477 382 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SSX2Q16385 188 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 EXOC3L2Q2M3D2 409 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SOWAHAQ2M3V2 549 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 VMACQ2NL98 169 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC39A12Q504Y0 691 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 KLHL26Q53HC5 615 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ZRANB3Q5FWF4 1079 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM201Q5SNT2 666 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 PRAMEF13Q5VWM6 474 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 RGMBQ6NW40 437 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ZC3H14Q6PJT7 736 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 HHIPL2Q6UWX4 724 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 RBMS3Q6XE24 437 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM91Q6ZNR0 172 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 QSOX2Q6ZRP7 698 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 USP30Q70CQ3 517 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 IKBIPQ70UQ0 350 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 TMUB2Q71RG4 321 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SSX9Q7RTT3 188 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 VTCN1Q7Z7D3 282 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 TSPAN33Q86UF1 283 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 UNC93AQ86WB7 457 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM131BQ86XD5 332 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SERPINA12Q8IW75 414 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM192Q8IY95 271 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SYNPOQ8N3V7 929 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 OXR1Q8N573 874 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 L3MBTL4Q8NA19 623 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM71CQ8NEG0 241 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM46DQ8NEK8 389 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 OR10G2Q8NGC3 310 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 OR56B4Q8NH76 319 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 OR14A16Q8NHC5 309 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 PHOSPHO1Q8TCT1 267 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SELENOMQ8WWX9 145 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 CNOT9Q92600 299 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 CHFRQ96EP1 664 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 C1GALT1C1Q96EU7 318 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 MASTLQ96GX5 879 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SENP5Q96HI0 755 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 C12orf66Q96MD2 445 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM193BQ96PV7 902 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 DMRTA2Q96SC8 542 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF382Q96SR6 550 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 DDOQ99489 341 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 TSNAXQ99598 290 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 CDC6Q99741 560 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 FICDQ9BVA6 458 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SPRTNQ9H040 489 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ENKD1Q9H0I2 346 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 NSUN3Q9H649 340 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 CLMPQ9H6B4 373 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 OPA3Q9H6K4 179 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC6A20Q9NP91 592 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ENAMQ9NRM1 1142 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 CYSLTR2Q9NS75 346 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ZFP57Q9NU63 452 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 ASIC5Q9NY37 505 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 TAS2R3Q9NYW6 316 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 GALPQ9UBC7 116 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 METTL1Q9UBP6 276 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SUSD2Q9UGT4 822 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 HACL1Q9UJ83 578 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 MRTO4Q9UKD2 239 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 PCTPQ9UKL6 214 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 PCDHB7Q9Y5E2 793 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 LY75O60449 1722 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 FNDC1Q4ZHG4 1894 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 A0A1B0GV90 55 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ZAR1LA6NP61 321 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 AGAP14A8MT82 685 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms