RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ANP32BQ92688 251 aaKnown RBP16.8■□□□□ 0.28
HDAC6-231ENST00000488905 HGDQ93099 445 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 OMA1Q96E52 524 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 CALHM2Q9HA72 323 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 NINJ2Q9NZG7 142 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 FETUBQ9UGM5 382 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 BCAP29Q9UHQ4 241 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 CES1P1Q9UKY3 287 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 SLC12A4Q9UP95 1085 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 TUBAL3A6NHL2 446 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 ACOX3O15254 700 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 SMIM24O75264 130 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 GUCY1B2O75343 617 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 ERAL1O75616 437 aaKnown RBP16.79■□□□□ 0.28
HDAC6-231ENST00000488905 RPS17P08708 135 aaKnown RBP16.79■□□□□ 0.28
HDAC6-231ENST00000488905 RHOXF2BP0C7M4 288 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 OPRM1P35372 400 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 DEKP35659 375 aaKnown RBP16.79■□□□□ 0.28
HDAC6-231ENST00000488905 FEN1P39748 380 aaKnown RBP16.79■□□□□ 0.28
HDAC6-231ENST00000488905 PTGDSP41222 190 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 AGFG1P52594 562 aaKnown RBP16.79■□□□□ 0.28
HDAC6-231ENST00000488905 DGKQP52824 942 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 MGAT2Q10469 447 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 GALNT1Q10472 559 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-231ENST00000488905 MAP4K2Q12851 820 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 FOXD4Q12950 439 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-231ENST00000488905 RCAN2Q14206 197 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 EXOSC7Q15024 291 aaKnown RBP16.79■□□□□ 0.28
HDAC6-231ENST00000488905 TSNAXIP1Q2TAA8 658 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 SGO1Q5FBB7 561 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 FBXW10Q5XX13 1052 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 DESI1Q6ICB0 168 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 SLC30A6Q6NXT4 461 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 C8orf74Q6P047 294 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 FAM111BQ6SJ93 734 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 C9orf106Q8NAJ2 232 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 TRPC4APQ8TEL6 797 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 MBD6Q96DN6 1003 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 LCORQ96JN0 433 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-231ENST00000488905 NODALQ96S42 347 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 EPB41L4BQ9H329 900 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 GALNT9Q9HCQ5 603 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 FARSBQ9NSD9 589 aaKnown RBP16.79■□□□□ 0.28
HDAC6-231ENST00000488905 KLRF1Q9NZS2 232 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 JKAMPQ9P055 326 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 ZNF639Q9UID6 485 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 PLLPQ9Y342 182 aa16.79■□□□□ 0.28
HDAC6-231ENST00000488905 A0A1B0GTL3 188 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 CBX7O95931 251 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 IL18BPO95998 194 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 ACTL6AO96019 429 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 INHBAP08476 426 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 EPXP11678 715 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 CYP4B1P13584 511 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 CSNK2A2P19784 350 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-231ENST00000488905 CNTFP26441 200 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 GCKP35557 465 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 SOX18P35713 384 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 ETF1P62495 437 aaKnown RBP16.78■□□□□ 0.28
HDAC6-231ENST00000488905 DUSP2Q05923 314 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 SNTA1Q13424 505 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 LETMD1Q6P1Q0 360 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 RPS27LQ71UM5 84 aaKnown RBP16.78■□□□□ 0.28
HDAC6-231ENST00000488905 NUP54Q7Z3B4 507 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 CAMKMTQ7Z624 323 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 MILR1Q7Z6M3 343 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 SIMC1Q8NDZ2 872 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 ZPLD1Q8TCW7 415 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 SLC44A1Q8WWI5 657 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 KLHL29Q96CT2 875 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 BRF2Q9HAW0 419 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 EHD3Q9NZN3 535 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 MAPRE3Q9UPY8 281 aa16.78■□□□□ 0.28
HDAC6-231ENST00000488905 PRAMEF25A6NGN4 478 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 ICOSLGO75144 302 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 UGT2B11O75310 529 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 GOSR1O95249 250 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 OTCP00480 354 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 PDYNP01213 254 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 RAF1P04049 648 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 TMIGD3P0DMS9 266 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-231ENST00000488905 SLCO1A2P46721 670 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 SYT10Q6XYQ8 523 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 TAOK1Q7L7X3 1001 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 ADCY4Q8NFM4 1077 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 OR52R1Q8NGF1 315 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 LINC01560Q8TB33 94 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 ZNF483Q8TF39 744 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-231ENST00000488905 SELENOMQ8WWX9 145 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 CTHRC1Q96CG8 243 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 PAFAH2Q99487 392 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 TUBA1CQ9BQE3 449 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 FUT8Q9BYC5 575 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 OR2B2Q9GZK3 357 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 SERHLQ9NQF3 203 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 DLL4Q9NR61 685 aa16.77■□□□□ 0.28
HDAC6-231ENST00000488905 NSD1Q96L73 2696 aaPredicted RBP16.77■□□□□ 0.27
HDAC6-231ENST00000488905 C2orf72A6NCS6 295 aa16.76■□□□□ 0.27
HDAC6-231ENST00000488905 FRG2CA6NGY1 282 aa16.76■□□□□ 0.27
HDAC6-231ENST00000488905 H0Y3Z8 333 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms