RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 BORAQ6PGQ7 559 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 TSPAN14Q8NG11 270 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 ZFAND2BQ8WV99 257 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 FIG4Q92562 907 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 RBM38Q9H0Z9 239 aaKnown RBP18.12■□□□□ 0.49
CCM2-216ENST00000488727 MAGIXQ9H6Y5 334 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 NTN4Q9HB63 628 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 SLC6A13Q9NSD5 602 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 PHF11Q9UIL8 331 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 MAPRE3Q9UPY8 281 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 A0A087WV48 116 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 MYOCOSA0A1B0GUC4 107 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 GNG14A0A1W2PPG7 69 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 ANXA4P09525 319 aaPredicted RBP18.12■□□□□ 0.49
CCM2-216ENST00000488727 CPN2P22792 545 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 CAPGP40121 348 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 PEX19P40855 299 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 KIR3DL1P43629 444 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 BTG2P78543 158 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 RHAGQ02094 409 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 TNFRSF17Q02223 184 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 MFSD4BQ5TF39 518 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 ADAMTS18Q8TE60 1221 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 UCN3Q969E3 161 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 TM4SF18Q96CE8 201 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 DGCR14Q96DF8 476 aaKnown RBP18.12■□□□□ 0.49
CCM2-216ENST00000488727 FAM120BQ96EK7 910 aaKnown RBP18.12■□□□□ 0.49
CCM2-216ENST00000488727 REXO5Q96IC2 774 aaKnown RBP18.12■□□□□ 0.49
CCM2-216ENST00000488727 VPS50Q96JG6 964 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 CRB3Q9BUF7 120 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 MS4A12Q9NXJ0 267 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 C3orf18Q9UK00 162 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 COMMD3-BMI1R4GMX3 469 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 V9GYQ6 96 aa18.12■□□□□ 0.49
CCM2-216ENST00000488727 TRIM64A6NGJ6 449 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 TRIM64CA6NLI5 447 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 AIFM1O95831 613 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 HPRP00739 348 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 ZNF23P17027 643 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 GSTT1P30711 240 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 MMP21Q8N119 569 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 OR8J2Q8NGG1 315 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 FAM162AQ96A26 154 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 CNTNAP3BQ96NU0 1288 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 INPP5KQ9BT40 448 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 CNTNAP3Q9BZ76 1288 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 GRIP2Q9C0E4 1043 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 DCAF13Q9NV06 445 aaKnown RBP18.11■□□□□ 0.49
CCM2-216ENST00000488727 FAM120CQ9NX05 1096 aaKnown RBP18.11■□□□□ 0.49
CCM2-216ENST00000488727 TUBA8Q9NY65 449 aaPredicted RBP18.11■□□□□ 0.49
CCM2-216ENST00000488727 CLDN16Q9Y5I7 305 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 LOC400499M0QZD8 3231 aa18.11■□□□□ 0.49
CCM2-216ENST00000488727 MAP1BP46821 2468 aaKnown RBP18.11■□□□□ 0.49
CCM2-216ENST00000488727 ZZEF1O43149 2961 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 WASHC1A8K0Z3 465 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 H0YAE9 185 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 NKX2-8O15522 239 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 MYO1DO94832 1006 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 FURINP09958 794 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 ATP6V1B1P15313 513 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 SH3BGRP55822 239 aaPredicted RBP18.1■□□□□ 0.49
CCM2-216ENST00000488727 UGT8Q16880 541 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 PGS1Q32NB8 556 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 ATP1A1-AS1Q5TC04 95 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 NDUFAF5Q5TEU4 345 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 ISLR2Q6UXK2 745 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 LRRC69Q6ZNQ3 347 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 USP51Q70EK9 711 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 DHRSXQ8N5I4 330 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCM2-216ENST00000488727 ADAMTS17Q8TE56 1095 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 C16orf78Q8WTQ4 265 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 SLC47A1Q96FL8 570 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 EGLN2Q96KS0 407 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 PAPOLBQ9NRJ5 636 aaKnown RBP18.1■□□□□ 0.49
CCM2-216ENST00000488727 DNAJB9Q9UBS3 223 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 SPACA6W5XKT8 324 aa18.1■□□□□ 0.49
CCM2-216ENST00000488727 GLOD5A6NK44 160 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 TGFBR3LH3BV60 316 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 RFXANKO14593 260 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 SCN2BO60939 215 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 MT-ND1P03886 318 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 HEXBP07686 556 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 NR2F6P10588 404 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 MAOAP21397 527 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 BUD31P41223 144 aaPredicted RBP18.09■□□□□ 0.49
CCM2-216ENST00000488727 CDKN2CP42773 168 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 ASMTP46597 345 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 ALDH3B2P48448 385 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 ALDH3A2P51648 485 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 EMP2P54851 167 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 WNT3P56703 355 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 TAS2R50P59544 299 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 TRA2BP62995 288 aaKnown RBP18.09■□□□□ 0.49
CCM2-216ENST00000488727 ADARB1P78563 741 aaKnown RBP18.09■□□□□ 0.49
CCM2-216ENST00000488727 ZNF763Q0D2J5 394 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 SSPNQ14714 243 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 CYBRD1Q53TN4 286 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 FAAH2Q6GMR7 532 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 OR4F3Q6IEY1 312 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms