RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 XPR1Q9UBH6 696 aa13.98□□□□□ -0.17
TRIM50-203ENST00000488217 SNX6Q9UNH7 406 aa13.98□□□□□ -0.17
TRIM50-203ENST00000488217 DTX4Q9Y2E6 619 aa13.98□□□□□ -0.17
TRIM50-203ENST00000488217 ZNF780BQ9Y6R6 833 aa13.98□□□□□ -0.17
TRIM50-203ENST00000488217 HCFC1P51610 2035 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 A0A1B0GTL3 188 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 TUBAL3A6NHL2 446 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 ACOX3O15254 700 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 CBR3O75828 277 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 EPXP11678 715 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 CPN1P15169 458 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 HSD17B3P37058 310 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 PPICP45877 212 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 AGFG1P52594 562 aaKnown RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 DCAF7P61962 342 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 TRA2BP62995 288 aaKnown RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 CKAP4Q07065 602 aaKnown RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 SNTA1Q13424 505 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 EXOSC7Q15024 291 aaKnown RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 TRMT12Q53H54 448 aaKnown RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 RPS27LQ71UM5 84 aaKnown RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 MMP21Q8N119 569 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 SIMC1Q8NDZ2 872 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 FAM83FQ8NEG4 500 aaPredicted RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 ZNF483Q8TF39 744 aaPredicted RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 HGDQ93099 445 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 OMA1Q96E52 524 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 RMND5BQ96G75 393 aaPredicted RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 ZNF681Q96N22 645 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 NODALQ96S42 347 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 MRPL46Q9H2W6 279 aaKnown RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 VPS29Q9UBQ0 182 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 PRODH2Q9UF12 536 aa13.97□□□□□ -0.17
TRIM50-203ENST00000488217 EXO1Q9UQ84 846 aaKnown RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 INTS1Q8N201 2190 aaKnown RBP13.97□□□□□ -0.17
TRIM50-203ENST00000488217 MBD3L4A6NDZ8 208 aaPredicted RBP13.96□□□□□ -0.17
TRIM50-203ENST00000488217 MBD3L3A6NE82 208 aaPredicted RBP13.96□□□□□ -0.17
TRIM50-203ENST00000488217 MBD3L5A6NJ08 208 aaPredicted RBP13.96□□□□□ -0.17
TRIM50-203ENST00000488217 POC1B-GALNT4F8VUJ3 575 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 IL18BPO95998 194 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 TSPAN8P19075 237 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 CNTFP26441 200 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 GCKP35557 465 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 SOX18P35713 384 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 PTGDSP41222 190 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 EMDP50402 254 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 RCAN2Q14206 197 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 TEX35Q5T0J7 233 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 LETMD1Q6P1Q0 360 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 TAOK1Q7L7X3 1001 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 TGIF2LYQ8IUE0 185 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 WDSUB1Q8N9V3 476 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 OR52R1Q8NGF1 315 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 MBD3L2Q8NHZ7 208 aaPredicted RBP13.96□□□□□ -0.17
TRIM50-203ENST00000488217 LINC01560Q8TB33 94 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 IFT81Q8WYA0 676 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 PAFAH2Q99487 392 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 FAIM2Q9BWQ8 316 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 C1QTNF3Q9BXJ4 246 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 ITPAQ9BY32 194 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 CDC42EP4Q9H3Q1 356 aaKnown RBP13.96□□□□□ -0.17
TRIM50-203ENST00000488217 JKAMPQ9P055 326 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 ZNF180Q9UJW8 692 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 CBLCQ9ULV8 474 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 GPR55Q9Y2T6 319 aaPredicted RBP13.96□□□□□ -0.17
TRIM50-203ENST00000488217 PLLPQ9Y342 182 aa13.96□□□□□ -0.17
TRIM50-203ENST00000488217 PHF3Q92576 2039 aaKnown RBP13.96□□□□□ -0.17
TRIM50-203ENST00000488217 NF1P21359 2839 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 TRIM49D1C9J1S8 452 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 SNPHO15079 494 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 TO15178 435 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 DIAPH2O60879 1101 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 UGT2B11O75310 529 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 BCAS2O75934 225 aaPredicted RBP13.95□□□□□ -0.18
TRIM50-203ENST00000488217 CBX7O95931 251 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 RPS17P08708 135 aaKnown RBP13.95□□□□□ -0.18
TRIM50-203ENST00000488217 SBK3P0C264 359 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 RHOXF2BP0C7M4 288 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 CYP4B1P13584 511 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 ALDH9A1P49189 494 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 DGKQP52824 942 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 CLCQ05315 142 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 DUSP2Q05923 314 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 CEBPEQ15744 281 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 NNATQ16517 81 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 DCST1Q5T197 706 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 LGSNQ5TDP6 509 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 FAM180BQ6P0A1 224 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 TRIM42Q8IWZ5 723 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 CCDC116Q8IYX3 515 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 C1orf52Q8N6N3 182 aaKnown RBP13.95□□□□□ -0.18
TRIM50-203ENST00000488217 DCAKDQ8WVC6 231 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 KLHL29Q96CT2 875 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 TMCO6Q96DC7 493 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 CNRIP1Q96F85 164 aaPredicted RBP13.95□□□□□ -0.18
TRIM50-203ENST00000488217 SERHLQ9NQF3 203 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 KLRF1Q9NZS2 232 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 DMGDHQ9UI17 866 aaKnown RBP13.95□□□□□ -0.18
TRIM50-203ENST00000488217 ZNF225Q9UK10 706 aa13.95□□□□□ -0.18
TRIM50-203ENST00000488217 UTS2RQ9UKP6 389 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms