RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PSD3Q9NYI0 1048 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 C6orf203Q9P0P8 240 aaPredicted RBP17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 NDRG3Q9UGV2 375 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 PACSIN3Q9UKS6 424 aa17.67■□□□□ 0.42
SMPDL3A-202ENST00000487215 FOXE1O00358 373 aaPredicted RBP17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 CPMP14384 443 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 CPOXP36551 454 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 PIK3CGP48736 1102 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 DIO3P55073 304 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 PFKFB4Q16877 469 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 KBTBD12Q3ZCT8 623 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 C3orf62Q6ZUJ4 267 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 TRIM42Q8IWZ5 723 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 WDSUB1Q8N9V3 476 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 RDH11Q8TC12 318 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 PIGTQ969N2 578 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 OMA1Q96E52 524 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 KCNF1Q9H3M0 494 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 KLRF1Q9NZS2 232 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 EXO1Q9UQ84 846 aaKnown RBP17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 RNF11Q9Y3C5 154 aa17.66■□□□□ 0.42
SMPDL3A-202ENST00000487215 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 SYCE1LA8MT33 242 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 EIF3HO15372 352 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 SIAH2O43255 324 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 CBR3O75828 277 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 TNFSF13O75888 250 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 SEMA3DO95025 777 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 GFAPP14136 432 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 CNTFP26441 200 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 CRABP2P29373 138 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 STARP49675 285 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 GFRA1P56159 465 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 GPX6P59796 221 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 MRPS25P82663 173 aaKnown RBP17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 PLCXD2Q0VAA5 305 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 SNTA1Q13424 505 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 GAB1Q13480 694 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 GOLGA7Q7Z5G4 137 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 CENPLQ8N0S6 344 aaPredicted RBP17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 PPM1NQ8N819 430 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 L3MBTL4Q8NA19 623 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 KCTD4Q8WVF5 259 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 CTHRC1Q96CG8 243 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 SERPINI1Q99574 410 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 IPPKQ9H8X2 491 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 EHD3Q9NZN3 535 aa17.65■□□□□ 0.42
SMPDL3A-202ENST00000487215 A0A1W2PNV4 684 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 PRAMEF25A6NGN4 478 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 DEFB108AA8MXU0 73 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 PLOD2O00469 737 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 SMAD7O15105 426 aaKnown RBP17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 CTIFO43310 598 aaKnown RBP17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 UGT2B11O75310 529 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 PORP16435 677 aaPredicted RBP17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 LHX2P50458 406 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 ALDH18A1P54886 795 aaKnown RBP17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 EEF1A1P68104 462 aaKnown RBP17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 IRF9Q00978 393 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 MGAT2Q10469 447 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 CALCOCO2Q13137 446 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 GTF2H2Q13888 395 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 EXOSC7Q15024 291 aaKnown RBP17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 PRICKLE4Q2TBC4 344 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 EEF1A1P5Q5VTE0 462 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 GTF2H2CQ6P1K8 395 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 FAM111BQ6SJ93 734 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 SCIMPQ6UWF3 145 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 YTHDF3Q7Z739 585 aaKnown RBP17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 IFNEQ86WN2 208 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 GRAMD2AQ8IUY3 354 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 RHEBL1Q8TAI7 183 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 LCORQ96JN0 433 aaPredicted RBP17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 BRINP2Q9C0B6 783 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 TAS2R10Q9NYW0 307 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 MAT2BQ9NZL9 334 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 BCAP29Q9UHQ4 241 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 CFL2Q9Y281 166 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 MED12Q93074 2177 aa17.64■□□□□ 0.41
SMPDL3A-202ENST00000487215 MSTNO14793 375 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 TGM6O95932 706 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 KLK1P06870 262 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 CHMP24386 653 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 FAM27E3Q08E93 113 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 PRSS57Q6UWY2 283 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 SIMC1Q8NDZ2 872 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 WFIKKN1Q96NZ8 548 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 CDK15Q96Q40 435 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 BDH2Q9BUT1 245 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 DPH5Q9H2P9 285 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 UBTD1Q9HAC8 227 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 KLHL28Q9NXS3 571 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 ZNF639Q9UID6 485 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 ACOT9Q9Y305 439 aa17.63■□□□□ 0.41
SMPDL3A-202ENST00000487215 JMJD1CQ15652 2540 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 TRIM64A6NGJ6 449 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 TRIM64BA6NI03 449 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 ACOX3O15254 700 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 HCRTR2O43614 444 aa17.62■□□□□ 0.41
SMPDL3A-202ENST00000487215 SIX3O95343 332 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms