RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 C14orf79Q96F83 325 aa17.5■□□□□ 0.39
CLIP2-206ENST00000487091 LCORQ96JN0 433 aaPredicted RBP17.5■□□□□ 0.39
CLIP2-206ENST00000487091 RILPQ96NA2 401 aa17.5■□□□□ 0.39
CLIP2-206ENST00000487091 SHCBP1LQ9BZQ2 653 aa17.5■□□□□ 0.39
CLIP2-206ENST00000487091 L2HGDHQ9H9P8 463 aa17.5■□□□□ 0.39
CLIP2-206ENST00000487091 MID1IP1Q9NPA3 183 aa17.5■□□□□ 0.39
CLIP2-206ENST00000487091 KCNJ16Q9NPI9 418 aa17.5■□□□□ 0.39
CLIP2-206ENST00000487091 TNFRSF10DQ9UBN6 386 aa17.5■□□□□ 0.39
CLIP2-206ENST00000487091 GRID1Q9ULK0 1009 aa17.5■□□□□ 0.39
CLIP2-206ENST00000487091 FAM47E-STBD1D6RA91 191 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 UBFD1O14562 309 aaKnown RBP17.49■□□□□ 0.39
CLIP2-206ENST00000487091 BCAS2O75934 225 aaPredicted RBP17.49■□□□□ 0.39
CLIP2-206ENST00000487091 TOXO94900 526 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 IL3P08700 152 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 DRD5P21918 477 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 GDF1P27539 372 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 TIA1P31483 386 aaKnown RBP eCLIP17.49■□□□□ 0.39
CLIP2-206ENST00000487091 CRHR1P34998 444 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 PPICP45877 212 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 EMDP50402 254 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 DNAJB13P59910 316 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 C1orf185Q5T7R7 199 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 BICRALQ6AI39 1079 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 MEX3BQ6ZN04 569 aaKnown RBP17.49■□□□□ 0.39
CLIP2-206ENST00000487091 CCDC116Q8IYX3 515 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 PRR22Q8IZ63 422 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 LIX1Q8N485 282 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 OR52R1Q8NGF1 315 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 C16orf78Q8WTQ4 265 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 TMEM41AQ96HV5 264 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 KCNA7Q96RP8 456 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 ITPAQ9BY32 194 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 SLC6A15Q9H2J7 730 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 UBQLN3Q9H347 655 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 EHD3Q9NZN3 535 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 PLLPQ9Y342 182 aa17.49■□□□□ 0.39
CLIP2-206ENST00000487091 TO15178 435 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 PLIN3O60664 434 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 PCSK2P16519 638 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 IGFBP2P18065 325 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 MASP1P48740 699 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 NAGLUP54802 743 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 TFF3Q07654 80 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 LTB4RQ15722 352 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 ZNF628Q5EBL2 1059 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 FNDC7Q5VTL7 733 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 FAM180BQ6P0A1 224 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 FRMD7Q6ZUT3 714 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 SIMC1Q8NDZ2 872 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 OR10Q1Q8NGQ4 319 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 RDH11Q8TC12 318 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 UCK2Q9BZX2 261 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 PFDN4Q9NQP4 134 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 ARHGAP21Q5T5U3 1957 aa17.48■□□□□ 0.39
CLIP2-206ENST00000487091 NKX2-6A6NCS4 301 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 FAM90A27PA6NNH2 459 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 FOXO6A8MYZ6 492 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 AHRRA9YTQ3 701 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 HPNP05981 417 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 ELAVL4P26378 380 aaKnown RBP17.47■□□□□ 0.39
CLIP2-206ENST00000487091 SLCO1A2P46721 670 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 ZFP36L2P47974 494 aaKnown RBP17.47■□□□□ 0.39
CLIP2-206ENST00000487091 CDK9P50750 372 aaKnown RBP17.47■□□□□ 0.39
CLIP2-206ENST00000487091 FOXA1P55317 472 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 MRPS35P82673 323 aaKnown RBP17.47■□□□□ 0.39
CLIP2-206ENST00000487091 BTKQ06187 659 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 SNTA1Q13424 505 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 CEBPEQ15744 281 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 NNATQ16517 81 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 SLC30A6Q6NXT4 461 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 SCIMPQ6UWF3 145 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 TRIM46Q7Z4K8 759 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 HGDQ93099 445 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 EXOSC8Q96B26 276 aaKnown RBP17.47■□□□□ 0.39
CLIP2-206ENST00000487091 OMA1Q96E52 524 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 LURAP1Q96LR2 239 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 GNRHR2Q96P88 292 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 METTL7AQ9H8H3 244 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 SLC35C2Q9NQQ7 365 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 NPDC1Q9NQX5 325 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-206ENST00000487091 GIMAP4Q9NUV9 329 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 ALKBH4Q9NXW9 302 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 GPR55Q9Y2T6 319 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-206ENST00000487091 C15orf41Q9Y2V0 281 aa17.47■□□□□ 0.39
CLIP2-206ENST00000487091 PDZD2O15018 2839 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 A0A0G2JNJ9 132 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 FRG2CA6NGY1 282 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 TRAPPC6AO75865 159 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 ANXA4P09525 319 aaPredicted RBP17.46■□□□□ 0.39
CLIP2-206ENST00000487091 CPA3P15088 417 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 MSX1P28360 303 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 MPIP34949 423 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 TRPC1P48995 793 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 ZNF763Q0D2J5 394 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 PLCXD2Q0VAA5 305 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 CFAP157Q5JU67 520 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 SPDYAQ5MJ70 313 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 RIPPLY2Q5TAB7 128 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 TIGD3Q6B0B8 471 aa17.46■□□□□ 0.39
CLIP2-206ENST00000487091 ULK2Q8IYT8 1036 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms