RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 OR2L13Q8N349 312 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 CDRT4Q8N9R6 151 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 TMEM52Q8NDY8 209 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 OR7G2Q8NG99 324 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 OR5D16Q8NGK9 328 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 OR10Q1Q8NGQ4 319 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 OR51Q1Q8NH59 317 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 OR1L3Q8NH93 324 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 IFI44Q8TCB0 444 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ANKRD9Q96BM1 317 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 TAMM41Q96BW9 452 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 NRBF2Q96F24 287 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 RBM18Q96H35 190 aaKnown RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF578Q96N58 590 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 RDH12Q96NR8 316 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 DGAT2Q96PD7 388 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 TRNT1Q96Q11 434 aaKnown RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 OR1F2PQ96R84 312 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 OR7D2Q96RA2 312 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 GFM1Q96RP9 751 aaKnown RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SLC29A1Q99808 456 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 RBM4BQ9BQ04 359 aaKnown RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 NUDT22Q9BRQ3 303 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 YIPF4Q9BSR8 244 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 RBM4Q9BWF3 364 aaKnown RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 YIPF2Q9BWQ6 316 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SLC7A5P2Q9GIP4 190 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ARRDC1-AS1Q9H2J1 176 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SERHL2Q9H4I8 314 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 RUBCNLQ9H714 662 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SYNDIG1Q9H7V2 258 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 REEP1Q9H902 201 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 NTN4Q9HB63 628 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 BCL2L10Q9HD36 194 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 EQTNQ9NQ60 294 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 THSD1Q9NS62 852 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 FGF21Q9NSA1 209 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 GIN1Q9NXP7 522 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 TMEM9Q9P0T7 183 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 PDP2Q9P2J9 529 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SEC14L3Q9UDX4 400 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ATXN7L1Q9ULK2 861 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SRPK3Q9UPE1 567 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 FAM32AQ9Y421 112 aaKnown RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 MMACHCQ9Y4U1 282 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 PCDHGB2Q9Y5G2 931 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ORC6Q9Y5N6 252 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 GPC6Q9Y625 555 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 U3KQA8 63 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 RALGAPA1Q6GYQ0 2036 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 A0A1B0GX78 115 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 SYNDIG1LA6NDD5 238 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 TTC36A6NLP5 189 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 H3BMH7 237 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 CASC3O15234 703 aaKnown RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ACOX3O15254 700 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF749O43361 778 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 DYRK3O43781 588 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 LILRA1O75019 489 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 MFN2O95140 757 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 MED26O95402 600 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 LDOC1O95751 146 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 AK1P00568 194 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ALBP02768 609 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 IFNW1P05000 195 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 FESP07332 822 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 HBQ1P09105 142 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ALOX5P09917 674 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 FOLR1P15328 257 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 CDH2P19022 906 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 FPR1P21462 350 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 FBLP22087 321 aaKnown RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 GALNSP34059 522 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 PTGER1P34995 402 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 DCTP40126 519 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 GRK6P43250 576 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 XCR1P46094 333 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 MAN2A2P49641 1150 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 CRYBA2P53672 197 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 RAD23AP54725 363 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 IGLV3-21P80748 117 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 MRPS35P82673 323 aaKnown RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 VLDLRP98155 873 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 MAT1AQ00266 395 aaKnown RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 MAP4K2Q12851 820 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 TRA2AQ13595 282 aaKnown RBP eCLIP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 PDK3Q15120 406 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ZNHIT3Q15649 155 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 LPAL2Q16609 132 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 PRICKLE4Q2TBC4 344 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 RFX4Q33E94 735 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 TRMT12Q53H54 448 aaKnown RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 RPS26P11Q5JNZ5 115 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 OTUD3Q5T2D3 398 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 C6orf52Q5T4I8 152 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 FHL5Q5TD97 284 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 SHQ1Q6PI26 577 aaKnown RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 FAM111BQ6SJ93 734 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 MED25Q71SY5 747 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms